RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 WARS2Q9UGM6 360 aaKnown RBP8.13□□□□□ -1.11
HPS4-204ENST00000422379 USP24Q9UPU5 2620 aa8.13□□□□□ -1.11
HPS4-204ENST00000422379 MAP1BP46821 2468 aaKnown RBP8.12□□□□□ -1.11
HPS4-204ENST00000422379 ZC3H12DA2A288 527 aaKnown RBP8.12□□□□□ -1.11
HPS4-204ENST00000422379 CLCA1A8K7I4 914 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 LRRN3E7EW58 273 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 KPNA4O00629 521 aaPredicted RBP8.12□□□□□ -1.11
HPS4-204ENST00000422379 CDC42EP2O14613 210 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 TP53I11O14683 189 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 KLF4O43474 513 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 C21orf33P30042 268 aaPredicted RBP8.12□□□□□ -1.11
HPS4-204ENST00000422379 RFC3P40938 356 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 OMPP47874 163 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 RRADP55042 308 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 MVKQ03426 396 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 EGR4Q05215 589 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 C17orf67Q0P5P2 114 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 ST3GAL3Q11203 375 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 MFAP5Q13361 173 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 TRAM2Q15035 370 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 OR1C1Q15619 314 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 ZSWIM7Q19AV6 140 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 ALG10BQ5I7T1 473 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 AGAP7PQ5VUJ5 663 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 C1QL3Q5VWW1 255 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 C12orf73Q69YU5 71 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 C1orf94Q6P1W5 598 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 CD300LDQ6UXZ3 194 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 SLC16A12Q6ZSM3 486 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 PTCHD4Q6ZW05 846 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 NRMQ8IXM6 262 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 LINC00471Q8N535 108 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 RAB2BQ8WUD1 216 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 GGHQ92820 318 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 SLC38A4Q969I6 547 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 DNAJA3Q96EY1 480 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 CRELD1Q96HD1 420 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 SGCZQ96LD1 299 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 AGAP4Q96P64 663 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 TRIM2Q9C040 744 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 EVA1AQ9H8M9 152 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 KLHL1Q9NR64 748 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 MED17Q9NVC6 651 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 SELENONQ9NZV5 590 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 CNIH4Q9P003 139 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 PPP4R1LQ9P1A2 415 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 OSGIN1Q9UJX0 560 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 NCKAP5O14513 1909 aa8.12□□□□□ -1.11
HPS4-204ENST00000422379 ANKRD33BA6NCL7 494 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ANKUB1A6NFN9 424 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 SNPHO15079 494 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 CHP2O43745 196 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 MPZL2O60487 215 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 SLC25A12O75746 678 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 LCKP06239 509 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 CDK1P06493 297 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 PRKCAP17252 672 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 CCNA2P20248 432 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 MAKP20794 623 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 NR4A1P22736 598 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 PSMB9P28065 219 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 TACR3P29371 465 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 SLC1A3P43003 542 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 C19orf57Q0VDD7 668 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 COX10Q12887 443 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 FOXF1Q12946 379 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 NFATC3Q12968 1075 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 SNTA1Q13424 505 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 FHL1Q13642 323 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 PLPPR5Q32ZL2 321 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 SYT6Q5T7P8 510 aaPredicted RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 WBP2NLQ6ICG8 309 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 SLC30A6Q6NXT4 461 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ULK3Q6PHR2 472 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 POMZP3Q6PJE2 187 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 IGFL2Q6UWQ7 119 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 MBOAT2Q6ZWT7 520 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 MISPQ8IVT2 679 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ZNF440Q8IYI8 595 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ACOT11Q8WXI4 607 aaPredicted RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 MYDGFQ969H8 173 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 FAM46AQ96IP4 442 aaKnown RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 UTP23Q9BRU9 249 aaKnown RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 TMEM27Q9HBJ8 222 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 TEKT2Q9UIF3 430 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ENPP5Q9UJA9 477 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 VDAC3Q9Y277 283 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 A0A087WUJ7 227 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 OR5H15A6NDH6 313 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 K7ENP7 123 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ETV2O00321 342 aaPredicted RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 ZIC3O60481 467 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 WISP2O76076 250 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 NUDT14O95848 222 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 STSP08842 583 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 GPR4P46093 362 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 SLC6A8P48029 635 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ALDH6A1Q02252 535 aaKnown RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 DYNC1I2Q13409 638 aaKnown RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 AQP6Q13520 282 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms