RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 DOCK10Q96BY6 2186 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 HEATR5AQ86XA9 2040 aa12.89□□□□□ -0.35
SHMT1P1-201ENST00000419974 TRAV17A0A0B4J275 112 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 UNC119BA6NIH7 251 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ENO4A6NNW6 628 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 FTCDNL1E5RQL4 147 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 BCKDKO14874 412 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 MPZL2O60487 215 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 HCN1O60741 890 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR7A10O76100 309 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ITGB2P05107 769 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 APEHP13798 732 aaKnown RBP12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 SMSP52788 366 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 PRPS1P60891 318 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 CXCR4P61073 352 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ARG2P78540 354 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 C19orf57Q0VDD7 668 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 FOXF1Q12946 379 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZNF239Q16600 458 aaKnown RBP12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZBED5Q49AG3 693 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 C12orf73Q69YU5 71 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 THAP5Q7Z6K1 395 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 SULF2Q8IWU5 870 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 C8orf59Q8N0T1 100 aaPredicted RBP12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 DEPDC4Q8N2C3 294 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 SCAIQ8N9R8 606 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 MFSD8Q8NHS3 518 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 CYGBQ8WWM9 190 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 DDIT4LQ96D03 193 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 C5orf34Q96MH7 638 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 MUS81Q96NY9 551 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 RIBC2Q9H4K1 309 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 TUBA8Q9NY65 449 aaPredicted RBP12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 B4GALT7Q9UBV7 327 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 HDGFL3Q9Y3E1 203 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 CORINQ9Y5Q5 1042 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 BAHCC1Q9P281 2608 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 TMEM72A0PK05 275 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 TRIM64A6NGJ6 449 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 A6NL46 340 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 GNB5O14775 395 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 EFNA2O43921 213 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 PIP5K1CO60331 668 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 BGLAPP02818 100 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 GNAO1P09471 354 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 FUT1P19526 365 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 EPHA2P29317 976 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 GPR4P46093 362 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 DNASE1L1P49184 302 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 B3GALT5-AS1P59052 145 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 RAC1P63000 192 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 PDK3Q15120 406 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 C1orf140Q5VVS0 124 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 SLC27A4Q6P1M0 643 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 BORAQ6PGQ7 559 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 SMARCD3Q6STE5 483 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 UGT2A3Q6UWM9 527 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ASB18Q6ZVZ8 466 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 OAFQ86UD1 273 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 CCDC71Q8IV32 467 aaPredicted RBP12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 LNX2Q8N448 690 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ADPRHL1Q8NDY3 354 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 KTI12Q96EK9 354 aaPredicted RBP12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZNF570Q96NI8 536 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 PRRG3Q9BZD7 231 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZNF703Q9H7S9 590 aaPredicted RBP12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 ACKR4Q9NPB9 350 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 NANSQ9NR45 359 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 PNPLA3Q9NST1 481 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 UBAP1Q9NZ09 502 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 PLA2G3Q9NZ20 509 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 VDAC3Q9Y277 283 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 GMPPBQ9Y5P6 360 aa12.88□□□□□ -0.35
SHMT1P1-201ENST00000419974 A0A0G2JMM0 328 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 A0A1W2PPB8 328 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 A0A1W2PRS3 328 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 GJE1A6NN92 205 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 KIR3DP1A8MWS1 328 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 ARPC3O15145 178 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 DNPH1O43598 174 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 IDH3BO43837 385 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 WISP1O95388 367 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 HMGN1P05114 100 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 BMP7P18075 431 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 GABRB1P18505 474 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 HK1P19367 917 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 UQCRC1P31930 480 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 FXYD6P3P58550 94 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 CDC42P60953 191 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 SNRPGP62308 76 aaKnown RBP12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 CSNK2BP67870 215 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 LTBQ06643 244 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZP4Q12836 540 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 RAPSNQ13702 412 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 SYT14P1Q58G82 188 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZNF766Q5HY98 468 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 RPUSD3Q6P087 351 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms