RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ZNF117Q03924 483 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 LRRC74AQ0VAA2 488 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 FUT5Q11128 374 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 FOXF2Q12947 444 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 GSTA3Q16772 222 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 PLPPR5Q32ZL2 321 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 NDUFAF6Q330K2 333 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ARHGAP11BQ3KRB8 267 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 FBXL19-AS1Q494R0 122 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 KLHL26Q53HC5 615 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 HEPHL1Q6MZM0 1159 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 TNFAIP8L2Q6P589 184 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 CBLN3Q6UW01 205 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 EPGNQ6UW88 154 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 OLIG3Q7RTU3 272 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 C16orf62Q7Z3J2 963 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 MTERF4Q7Z6M4 381 aaKnown RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 GRAMD2AQ8IUY3 354 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 GTPBP8Q8N3Z3 284 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF614Q8N883 585 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 OR10H5Q8NGA6 315 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 OR9I1Q8NGQ6 314 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 SMPDL3BQ92485 455 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 RNF145Q96MT1 663 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ZFP3Q96NJ6 502 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 PANX1Q96RD7 426 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 NPAS1Q99742 590 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 NMUR2Q9GZQ4 415 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF350Q9GZX5 532 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 INTS9Q9NV88 658 aaKnown RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 EXD2Q9NVH0 621 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 JKAMPQ9P055 326 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF629Q9UEG4 869 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-205ENST00000419378 ICAM5Q9UMF0 924 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 DTNAQ9Y4J8 743 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 AP4B1Q9Y6B7 739 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 CREBBPQ92793 2442 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 OTOGQ6ZRI0 2925 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 PDZD2O15018 2839 aa6.21□□□□□ -1.42
HMGN1-205ENST00000419378 MED12LQ86YW9 2145 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 CDHR4A6H8M9 788 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 SERINC4A6NH21 518 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 SLC22A20A6NK97 555 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 EEF1E1-BLOC1S5C9J1V9 151 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 HMGN4O00479 90 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 RFXANKO14593 260 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 EEF1E1O43324 174 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 RCBTB2O95199 551 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 TGDSO95455 350 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 LINGO3P0C6S8 592 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 UBL4AP11441 157 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 IL11P20809 199 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 SSTR2P30874 369 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 UQCRC1P31930 480 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 OPRM1P35372 400 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 EIF1P41567 113 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 P2RX1P51575 399 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 POLR2JP52435 117 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 AQP5P55064 265 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 SUMO3P55854 103 aaPredicted RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 EEFSECP57772 596 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 HPCAP84074 193 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 FOXF1Q12946 379 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 SKP2Q13309 424 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 PON3Q15166 354 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 GPR68Q15743 365 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF141Q15928 474 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 CTU2Q2VPK5 515 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 TIGD2Q4W5G0 525 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 PDZK1Q5T2W1 519 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 ATAD3BQ5T9A4 648 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 TYW3Q6IPR3 259 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF621Q6ZSS3 439 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 MSANTD1Q6ZTZ1 278 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 CHMP1BQ7LBR1 199 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 P4HA3Q7Z4N8 544 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 GGNQ86UU5 652 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 RNF130Q86XS8 419 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 GCNT2Q8N0V5 402 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 TMCO5AQ8N6Q1 288 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 METTL25Q8N6Q8 603 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 TRIML2Q8N7C3 387 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 FNDC9Q8TBE3 224 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 POC1BQ8TC44 478 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 PNPT1Q8TCS8 783 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 CKAP2Q8WWK9 683 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 FIG4Q92562 907 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 RAB8BQ92930 207 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 RNASE6Q93091 150 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 ROPN1LQ96C74 230 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 INTS12Q96CB8 462 aaKnown RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 C14orf79Q96F83 325 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF845Q96IR2 970 aaPredicted RBP6.2□□□□□ -1.42
HMGN1-205ENST00000419378 EBF4Q9BQW3 602 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 SFXN3Q9BWM7 321 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 PINK1Q9BXM7 581 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 TCF7L2Q9NQB0 619 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 SLC6A13Q9NSD5 602 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 FAM30AQ9NZY2 134 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 KCNE5Q9UJ90 142 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms