RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ZNF229Q9UJW7 825 aa8.25□□□□□ -1.09
LINCMD1-201ENST00000418518 SSR3Q9UNL2 185 aa8.25□□□□□ -1.09
LINCMD1-201ENST00000418518 NPFFR2Q9Y5X5 522 aa8.25□□□□□ -1.09
LINCMD1-201ENST00000418518 PEX16Q9Y5Y5 336 aa8.25□□□□□ -1.09
LINCMD1-201ENST00000418518 LAMA1P25391 3075 aa8.25□□□□□ -1.09
LINCMD1-201ENST00000418518 IGLV3-32A0A0A0MS00 114 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 IGHV3-20A0A0C4DH32 117 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 IQCMA0A1B0GVH7 501 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 CDC14CA4D256 554 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 C12orf71A8MTZ7 269 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 B4E171 279 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 LRRN3E7EW58 273 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 J3QRK9 145 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 MEN1O00255 615 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 WWP2O00308 870 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 SLC30A4O14863 429 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 PLD2O14939 933 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 HCRTR2O43614 444 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 DKK1O94907 266 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 CD14P08571 375 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 SP9P0CG40 484 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 HIST1H1CP16403 213 aaKnown RBP8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 TACR3P29371 465 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 CCKBRP32239 447 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 SOX6P35712 828 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 TSPAN7P41732 249 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 GRK6P43250 576 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 CCR4P51679 360 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 SLC25A1P53007 311 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 TAS2R43P59537 309 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 RPS25P62851 125 aaKnown RBP8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 LTBQ06643 244 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 LGALS3BPQ08380 585 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 CBFBQ13951 182 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 C11orf91Q3C1V1 193 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 ZNF791Q3KP31 576 aaPredicted RBP8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 EMC4Q5J8M3 183 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 PHF19Q5T6S3 580 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 LYPD8Q6UX82 237 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 TMPRSS11AQ6ZMR5 421 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 MARCH3Q86UD3 253 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 LHFPL3Q86UP9 236 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 LSRQ86X29 649 aaPredicted RBP8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 EGFL6Q8IUX8 553 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 GPALPP1Q8IXQ4 340 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 LRRC17Q8N6Y2 441 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 GALNT6Q8NCL4 622 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 OR51G2Q8NGK0 314 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 STK35Q8TDR2 534 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 GPR119Q8TDV5 335 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 CHPT1Q8WUD6 406 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 METTL21AQ8WXB1 218 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 WDFY2Q96P53 400 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 NECAB3Q96P71 396 aaPredicted RBP8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 SNX18Q96RF0 628 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 LPAR4Q99677 370 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 CTRCQ99895 268 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 CRB3Q9BUF7 120 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 ASPNQ9BXN1 380 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 TBL1XR1Q9BZK7 514 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 NDEL1Q9GZM8 345 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 POLHQ9Y253 713 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 PCDHGA5Q9Y5G8 931 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 NOX1Q9Y5S8 564 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 IER3IP1Q9Y5U9 82 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 B3GALT1Q9Y5Z6 326 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 KIAA1549Q9HCM3 1950 aa8.24□□□□□ -1.09
LINCMD1-201ENST00000418518 USP34Q70CQ2 3546 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 TRAV36DV7A0A075B6V5 113 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 SLC35F4A4IF30 521 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 ANKUB1A6NFN9 424 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 GNB5O14775 395 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 ZNF354AO60765 605 aaPredicted RBP8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 SULT1C4O75897 302 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 MT-ATP6P00846 226 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 GP1BBP13224 206 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 MPLP40238 635 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 HTR3AP46098 478 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 DIO1P49895 249 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 POLR2HP52434 150 aaKnown RBP8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 PPP5CP53041 499 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 FOXL2P58012 376 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 ZNF85Q03923 595 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 PCOLCEQ15113 449 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 INAQ16352 499 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 TBC1D25Q3MII6 688 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 PLA2G2CQ5R387 149 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 GPR139Q6DWJ6 353 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 FAAH2Q6GMR7 532 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 LCN10Q6JVE6 187 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 TMEM81Q6P7N7 255 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 C16orf87Q6PH81 154 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 SHISA6Q6ZSJ9 500 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 GRINAQ7Z429 371 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 CCDC190Q86UF4 302 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 SYS1Q8N2H4 156 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 CYB561A3Q8NBI2 242 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 SDR9C7Q8NEX9 313 aa8.23□□□□□ -1.09
LINCMD1-201ENST00000418518 OR52E2Q8NGJ4 325 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms