RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 MCIDASD6RGH6 385 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 ZNF354AO60765 605 aaPredicted RBP15.27■□□□□ 0.03
SSBP3-205ENST00000417664 HIST1H2ABP04908 130 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 JMJD7P0C870 316 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 LIMS3P0CW19 117 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 LIMS4P0CW20 117 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 CDK4P11802 303 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 COX6A1P12074 109 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 SLC2A5P22732 501 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 PSMA1P25786 263 aaKnown RBP15.27■□□□□ 0.03
SSBP3-205ENST00000417664 NCS1P62166 190 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 ACSM1Q08AH1 577 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 CRMP1Q14194 572 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 SSX1Q16384 188 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 MOGQ16653 247 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 COL28A1Q2UY09 1125 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 LYPD8Q6UX82 237 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 C16orf47Q6ZP98 133 aaPredicted RBP15.27■□□□□ 0.03
SSBP3-205ENST00000417664 HIST3H2AQ7L7L0 130 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 DND1Q8IYX4 353 aaKnown RBP15.27■□□□□ 0.03
SSBP3-205ENST00000417664 KLHL36Q8N4N3 616 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 ACBD7Q8N6N7 88 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 C10orf53Q8N6V4 93 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 OR6S1Q8NH40 331 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 NDNFQ8TB73 568 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 TBC1D15Q8TC07 691 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 RPL3LQ92901 407 aaKnown RBP15.27■□□□□ 0.03
SSBP3-205ENST00000417664 HIST1H2ACQ93077 130 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 NDUFB11Q9NX14 153 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 IER3IP1Q9Y5U9 82 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 EXPH5Q8NEV8 1989 aa15.27■□□□□ 0.03
SSBP3-205ENST00000417664 IGLV3-32A0A0A0MS00 114 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 A8MVM7 634 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 LRRN3E7EW58 273 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 OR2J2O76002 312 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 CD14P08571 375 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 CPEP16870 476 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 UQCRC1P31930 480 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 CAPZA2P47755 286 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 LSM3P62310 102 aaKnown RBP15.26■□□□□ 0.03
SSBP3-205ENST00000417664 LGALS3BPQ08380 585 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 TOMM34Q15785 309 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-205ENST00000417664 EMC4Q5J8M3 183 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 TMEM81Q6P7N7 255 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 NDUFAF7Q7L592 441 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 CACTIN-AS1Q8N1I8 211 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 OR4F15Q8NGB8 312 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 ZNF524Q96C55 264 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 SPACA9Q96E40 222 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-205ENST00000417664 RASL10BQ96S79 203 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 SECISBP2Q96T21 854 aaKnown RBP15.26■□□□□ 0.03
SSBP3-205ENST00000417664 ARHGAP9Q9BRR9 750 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 FAM117AQ9C073 453 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 ERVK13-1Q9NX77 482 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 CAB39Q9Y376 341 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-205ENST00000417664 GPR179Q6PRD1 2367 aa15.26■□□□□ 0.03
SSBP3-205ENST00000417664 TMED7-TICAM2A0A0A6YYA0 188 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 ETV2O00321 342 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-205ENST00000417664 TP53I11O14683 189 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 OR2T1O43869 369 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 NPIPB7O75200 414 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 DKK1O94907 266 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 DLGAP3O95886 979 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 ICAM2P13598 275 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 HIST1H1CP16403 213 aaKnown RBP15.25■□□□□ 0.03
SSBP3-205ENST00000417664 SNTA1Q13424 505 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 TPBGQ13641 420 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 IL10RAQ13651 578 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 KLHL12Q53G59 568 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 ALG10Q5BKT4 473 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 SLC35D3Q5M8T2 416 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 FAM69AQ5T7M9 428 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 TMEM164Q5U3C3 297 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 LCN1P1Q5VSP4 162 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 FAM69BQ5VUD6 431 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 PAQR6Q6TCH4 344 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 OPN5Q6U736 354 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 TMPRSS11AQ6ZMR5 421 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 NANOGNBQ7Z5D8 188 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 PHC2Q8IXK0 858 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 SUMF1Q8NBK3 374 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 FAM98AQ8NCA5 519 aaKnown RBP15.25■□□□□ 0.03
SSBP3-205ENST00000417664 ZNF485Q8NCK3 441 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 OR52E2Q8NGJ4 325 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 OR51G2Q8NGK0 314 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 KISS1RQ969F8 398 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-205ENST00000417664 KTI12Q96EK9 354 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-205ENST00000417664 MOGAT1Q96PD6 335 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 DCSTAMPQ9H295 470 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 SIAEQ9HAT2 523 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 KLRF1Q9NZS2 232 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 TMED7Q9Y3B3 224 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 TTC28Q96AY4 2481 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 CCDC187A0A096LP49 1063 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-205ENST00000417664 CCDC182A6NF36 153 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 BLOC1S5-TXNDC5H3BN57 136 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 SUSD5O60279 629 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 TXNDC12O95881 172 aa15.25■□□□□ 0.03
SSBP3-205ENST00000417664 BGLAPP02818 100 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms