RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 KIAA1024LP59773 190 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 TRAM1Q15629 374 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 ST3GAL2Q16842 350 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF433Q8N7K0 673 aaPredicted RBP13.3□□□□□ -0.28
HDAC9-208ENST00000417496 RCBTB1Q8NDN9 531 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 PIGKQ92643 395 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 FAM131CQ96AQ9 280 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 RASD2Q96D21 266 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 TSSK2Q96PF2 358 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 CCDC3Q9BQI4 270 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 NOX4Q9NPH5 578 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 HCN3Q9P1Z3 774 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 LRIT1Q9P2V4 623 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 CPNE7Q9UBL6 633 aa13.3□□□□□ -0.28
HDAC9-208ENST00000417496 C7orf66A4D0T2 115 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 TRABD2BA6NFA1 517 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 PRR32B1ATL7 298 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 IFNGP01579 166 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 CD53P19397 219 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 ERVK-25P63136 954 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 ACTC1P68032 377 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 ACTA1P68133 377 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 MAT1AQ00266 395 aaKnown RBP13.29□□□□□ -0.28
HDAC9-208ENST00000417496 SNTB2Q13425 540 aaKnown RBP13.29□□□□□ -0.28
HDAC9-208ENST00000417496 ZSWIM7Q19AV6 140 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 TMEM255AQ5JRV8 349 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 ARHGAP11AQ6P4F7 1023 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 UBE2Q1Q7Z7E8 422 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 SLC35F2Q8IXU6 374 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 GATSQ8NAP1 163 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 HMGB4Q8WW32 186 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 GIMAP1Q8WWP7 306 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 MRGPRX1Q96LB2 322 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 CNN2Q99439 309 aaKnown RBP13.29□□□□□ -0.28
HDAC9-208ENST00000417496 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 UCKL1Q9NWZ5 548 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 ING4Q9UNL4 249 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 CACNA1CQ13936 2221 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 A0A0A6YYC8 382 aaPredicted RBP13.29□□□□□ -0.28
HDAC9-208ENST00000417496 I3L1I5 382 aaPredicted RBP13.29□□□□□ -0.28
HDAC9-208ENST00000417496 PIN1P1O15428 100 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 OGG1O15527 345 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 GMDSO60547 372 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 HPXP02790 462 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 MMP15P51511 669 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 GBX2P52951 348 aaPredicted RBP13.29□□□□□ -0.28
HDAC9-208ENST00000417496 PON3Q15166 354 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 CLPPQ16740 277 aaPredicted RBP13.29□□□□□ -0.28
HDAC9-208ENST00000417496 CMTM4Q8IZR5 234 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 HAVCR2Q8TDQ0 301 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 DNAJA3Q96EY1 480 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 GFI1Q99684 422 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 GABRG3Q99928 467 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 SYNDIG1Q9H7V2 258 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 FKRPQ9H9S5 495 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 ANKRD10Q9NXR5 420 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 SERTAD3Q9UJW9 196 aa13.29□□□□□ -0.28
HDAC9-208ENST00000417496 NDUFB2O95178 105 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 TNFRSF4P43489 277 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 NANOS3P60323 173 aaKnown RBP13.28□□□□□ -0.28
HDAC9-208ENST00000417496 BTG2P78543 158 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 C1orf61Q13536 156 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 GSG1Q2KHT4 349 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 ZCCHC12Q6PEW1 402 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 Q6ZSR6 202 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 C17orf50Q8WW18 174 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 RSC1A1Q92681 617 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 HSPA12BQ96MM6 686 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 LMF1Q96S06 567 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 C14orf105Q9NVL8 296 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 STMN3Q9NZ72 180 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 NCDNQ9UBB6 729 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 YBX2Q9Y2T7 364 aaKnown RBP13.28□□□□□ -0.28
HDAC9-208ENST00000417496 NUBP2Q9Y5Y2 271 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 HEATR5AQ86XA9 2040 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 TRAV1-2A0A0B4J238 106 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 A0A1W2PQ72 361 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 EPOPA6NHQ4 379 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 C2orf74A8MZ97 194 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 RPP14O95059 124 aaKnown RBP13.28□□□□□ -0.28
HDAC9-208ENST00000417496 OR2T7P0C7T2 308 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 ST6GAL1P15907 406 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 SRMP19623 302 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 HSD17B12Q53GQ0 312 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 FAM209AQ5JX71 171 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 NPSR1Q6W5P4 371 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 LINGO2Q7L985 606 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 TEX19Q8NA77 164 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF511Q8NB15 262 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 NPEPL1Q8NDH3 523 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 OR2T27Q8NH04 317 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 RIT1Q92963 219 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 TSPAN10Q9H1Z9 355 aaPredicted RBP13.28□□□□□ -0.28
HDAC9-208ENST00000417496 KLK11Q9UBX7 282 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 ENTPD2Q9Y5L3 495 aa13.28□□□□□ -0.28
HDAC9-208ENST00000417496 FANCMQ8IYD8 2048 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 BLOC1S5-TXNDC5H3BN57 136 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 NOS1APO75052 506 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 UCHL1P09936 223 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 H2AFB2P0C5Z0 115 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms