RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ENKD1Q9H0I2 346 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 DHCR7Q9UBM7 475 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 B4GALT6Q9UBX8 382 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZNF230Q9UIE0 474 aaPredicted RBP13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 LSM7Q9UK45 103 aaKnown RBP13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 PCOLCE2Q9UKZ9 415 aa13.59□□□□□ -0.23
NCKIPSD-204ENST00000416649 KANTRA0A1W2PQU2 76 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 TXNL1O43396 289 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 NARSO43776 548 aaKnown RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 GREM1O60565 184 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 NDUFB6O95139 128 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 NFYBP25208 207 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 BDKRB2P30411 391 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 PPM1AP35813 382 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 COL19A1Q14993 1142 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 ELFN2Q5R3F8 820 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 C5orf46Q6UWT4 87 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 Q6ZVL8 140 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 SSX6Q7RTT6 188 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR2W3Q7Z3T1 314 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 CACUL1Q86Y37 369 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 GID4Q8IVV7 300 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 CHST14Q8NCH0 376 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 IL17FQ96PD4 163 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 TREM1Q9NP99 234 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZDHHC4Q9NPG8 344 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 PRMT8Q9NR22 394 aaPredicted RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 ASF1AQ9Y294 204 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 BRWD1Q9NSI6 2320 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 IGLV3-16A0A075B6K0 115 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 FOXE1O00358 373 aaPredicted RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 PLPP1O14494 284 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 PRKRAO75569 313 aaKnown RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLC25A12O75746 678 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 UBBP0CG47 229 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 UBCP0CG48 685 aaKnown RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 ADCYAP1P18509 176 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 NPBWR1P48145 328 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 SPINT3P49223 89 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 ARFIP1P53367 373 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 RGS8P57771 180 aaPredicted RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 RPS27AP62979 156 aaKnown RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 UBA52P62987 128 aaKnown RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 CBFBQ13951 182 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 SMCO1Q147U7 214 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 GRASPQ7Z6J2 395 aaPredicted RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 LILRB2Q8N423 598 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR51L1Q8NGJ5 315 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 SYNPRQ8TBG9 265 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 OVCA2Q8WZ82 227 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 ZNF251Q9BRH9 671 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 PTDSS2Q9BVG9 487 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 MBD2Q9UBB5 411 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 GPN3Q9UHW5 284 aaPredicted RBP13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 ICKQ9UPZ9 632 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLC22A7Q9Y694 548 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 KCNE3Q9Y6H6 103 aa13.58□□□□□ -0.24
NCKIPSD-204ENST00000416649 NOTCH4Q99466 2003 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 ACOD1A6NK06 481 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 LILRB3O75022 631 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 ITGA10O75578 1167 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 ARL6IP5O75915 188 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 SNAPC5O75971 98 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 SLCO2B1O94956 709 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 CSF2RBP32927 897 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 P2RX1P51575 399 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 RPS15P62841 145 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 SNTB1Q13884 538 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 TRAM1Q15629 374 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 HYAL4Q2M3T9 481 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 TMEM71Q6P5X7 295 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 SYNPO2LQ9H987 977 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 FKRPQ9H9S5 495 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 POT1Q9NUX5 634 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 PLAGL1Q9UM63 463 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 INSL6Q9Y581 213 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 WNT6Q9Y6F9 365 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 F5P12259 2224 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 KIAA0355O15063 1070 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 CTDSPLO15194 276 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 GRM6O15303 877 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 LCMT2O60294 686 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 EIF1BO60739 113 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 FARS2O95363 451 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 ASGR2P07307 311 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 LINC00271P0C7V0 271 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 EIF1P41567 113 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 PCGF3Q3KNV8 242 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 C1orf53Q5VUE5 145 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 PHOSPHO1Q8TCT1 267 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 TM4SF18Q96CE8 201 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 S100A16Q96FQ6 103 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 MRPL48Q96GC5 212 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 C16orf58Q96GQ5 468 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 TLNRD1Q9H1K6 362 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR52D1Q9H346 318 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 BARX1Q9HBU1 254 aaPredicted RBP13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 ANKRD20A5PA0PJZ0 165 aa13.57□□□□□ -0.24
NCKIPSD-204ENST00000416649 OR14I1A6ND48 311 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms