RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 KLHL24Q6TFL4 600 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 FRRS1Q6ZNA5 592 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 SLC46A3Q7Z3Q1 461 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 CLECL1Q8IZS7 167 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 C4orf33Q8N1A6 199 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 CLEC4FQ8N1N0 589 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 ARFGAP2Q8N6H7 521 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 ANKS4BQ8N8V4 417 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 XAGE5Q8WWM1 108 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 HPS1Q92902 700 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 ROPN1LQ96C74 230 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 DDIT4LQ96D03 193 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 SF3B5Q9BWJ5 86 aaKnown RBP13.4□□□□□ -0.26
DDX56-202ENST00000415758 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.4□□□□□ -0.26
DDX56-202ENST00000415758 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 OSGIN1Q9UJX0 560 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 TMED7Q9Y3B3 224 aa13.4□□□□□ -0.26
DDX56-202ENST00000415758 FAAHO00519 579 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 KLF11O14901 512 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 SCN2BO60939 215 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 STAMBPO95630 424 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 CRYAAP02489 173 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 OR12D1P0DN82 309 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 CCNA2P20248 432 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 SERPINB5P36952 375 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 IDH3GP51553 393 aaPredicted RBP13.39□□□□□ -0.27
DDX56-202ENST00000415758 POLR2HP52434 150 aaKnown RBP13.39□□□□□ -0.27
DDX56-202ENST00000415758 FUT5Q11128 374 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 MAD2L1Q13257 205 aaPredicted RBP13.39□□□□□ -0.27
DDX56-202ENST00000415758 CARTPTQ16568 116 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 PGS1Q32NB8 556 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 HIKESHIQ53FT3 197 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 OR4F3Q6IEY1 312 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 ABHD12BQ7Z5M8 362 aaPredicted RBP13.39□□□□□ -0.27
DDX56-202ENST00000415758 CMIPQ8IY22 773 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 OR8J2Q8NGG1 315 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 C1orf159Q96HA4 380 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 ZNF317Q96PQ6 595 aaPredicted RBP13.39□□□□□ -0.27
DDX56-202ENST00000415758 RAB1BQ9H0U4 201 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 TMEM45AQ9NWC5 275 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 ASIC5Q9NY37 505 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 CRNNQ9UBG3 495 aaPredicted RBP13.39□□□□□ -0.27
DDX56-202ENST00000415758 TMEFF2Q9UIK5 374 aaPredicted RBP13.39□□□□□ -0.27
DDX56-202ENST00000415758 PRDM4Q9UKN5 801 aa13.39□□□□□ -0.27
DDX56-202ENST00000415758 TMEM72A0PK05 275 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 LRP5LA4QPB2 252 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 CLDN24A6NM45 220 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 LILRA1O75019 489 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 OR4A8P0C604 315 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 TACR3P29371 465 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 ARRB2P32121 409 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 SLC1A3P43003 542 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 EMX2Q04743 252 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 SMU1Q2TAY7 513 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 TBRG1Q3YBR2 411 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 OTUD3Q5T2D3 398 aaPredicted RBP13.38□□□□□ -0.27
DDX56-202ENST00000415758 ANKRD16Q6P6B7 361 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 AAED1Q7RTV5 226 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 FAM169BQ8N8A8 192 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 OR9K2Q8NGE7 335 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 AGR3Q8TD06 166 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 CNOT9Q92600 299 aaKnown RBP13.38□□□□□ -0.27
DDX56-202ENST00000415758 RAB8BQ92930 207 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 TUBGCP3Q96CW5 907 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 ZNF385AQ96PM9 386 aaKnown RBP13.38□□□□□ -0.27
DDX56-202ENST00000415758 KCNS3Q9BQ31 491 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 ADAM19Q9H013 955 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 MOV10Q9HCE1 1003 aaKnown RBP13.38□□□□□ -0.27
DDX56-202ENST00000415758 ZDHHC2Q9UIJ5 367 aa13.38□□□□□ -0.27
DDX56-202ENST00000415758 TENM1Q9UKZ4 2725 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 ARPC4-TTLL3A0A0A6YYG9 625 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 PRSS51A0A1B0GVH4 220 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 ZC3H12DA2A288 527 aaKnown RBP13.37□□□□□ -0.27
DDX56-202ENST00000415758 PRAMEF27A3QJZ7 478 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 AQP7P3A6NL99 342 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 AP3D1O14617 1153 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 IGLV1-44P01699 117 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 ITGA2P17301 1181 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 CDH2P19022 906 aaPredicted RBP13.37□□□□□ -0.27
DDX56-202ENST00000415758 UQCRC2P22695 453 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 CHN2P52757 468 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 NAAAQ02083 359 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 SAXO2Q658L1 398 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 TNFAIP8L2Q6P589 184 aaPredicted RBP13.37□□□□□ -0.27
DDX56-202ENST00000415758 UGT2A3Q6UWM9 527 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 SPATA19Q7Z5L4 167 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 ZNF786Q8N393 782 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 TMEM99Q8N816 258 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 LINC01356Q8N9X3 169 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 OR4F15Q8NGB8 312 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 OR1K1Q8NGR3 316 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 MAGEE2Q8TD90 523 aaPredicted RBP13.37□□□□□ -0.27
DDX56-202ENST00000415758 NEU4Q8WWR8 484 aaPredicted RBP13.37□□□□□ -0.27
DDX56-202ENST00000415758 BCL2L2Q92843 193 aaPredicted RBP13.37□□□□□ -0.27
DDX56-202ENST00000415758 AURKBQ96GD4 344 aaPredicted RBP13.37□□□□□ -0.27
DDX56-202ENST00000415758 ZIM3Q96PE6 472 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 MECRQ9BV79 373 aa13.37□□□□□ -0.27
DDX56-202ENST00000415758 NOP53Q9NZM5 478 aaKnown RBP13.37□□□□□ -0.27
DDX56-202ENST00000415758 DYSFO75923 2080 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms