RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CARD17Q5XLA6 110 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 TMEM198Q66K66 360 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 LCLAT1Q6UWP7 414 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PLEKHG7Q6ZR37 379 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZCCHC23Q6ZST2 131 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 TRMT11Q7Z4G4 463 aaKnown RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAM131BQ86XD5 332 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PLD3Q8IV08 490 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPR65Q8IYL9 337 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CLEC4FQ8N1N0 589 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF786Q8N393 782 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SVOPLQ8N434 492 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 COMMD1Q8N668 190 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PQLC3Q8N755 202 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 RNF148Q8N7C7 305 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF781Q8N8C0 355 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 FNDC5Q8NAU1 212 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF485Q8NCK3 441 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR2T12Q8NG77 320 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 HTR3CQ8WXA8 447 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ATL1Q8WXF7 558 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ARNTL2Q8WYA1 636 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 FCGR1BQ92637 280 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLCO4A1Q96BD0 722 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PPWD1Q96BP3 646 aaKnown RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR52B2Q96RD2 323 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 MRPL57Q9BQC6 102 aaKnown RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 FEM1AQ9BSK4 669 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PARD6GQ9BYG4 376 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 POTEKPQ9BYX7 375 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PKIBQ9C010 78 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR2B2Q9GZK3 357 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 TPK1Q9H3S4 243 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 RHOJQ9H4E5 214 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ASB7Q9H672 318 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SRD5A3Q9H8P0 318 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 NANOGQ9H9S0 305 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 LMAN1LQ9HAT1 526 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SIAEQ9HAT2 523 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CHMP1AQ9HD42 196 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 CCNB1IP1Q9NPC3 277 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF275Q9NSD4 429 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 C20orf96Q9NUD7 363 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 USE1Q9NZ43 259 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ADA2Q9NZK5 511 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 KLHL8Q9P2G9 620 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 POLLQ9UGP5 575 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 DAPK2Q9UIK4 370 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ENPP5Q9UJA9 477 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 STAP1Q9ULZ2 295 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ERVW-1Q9UQF0 538 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 ACOT9Q9Y305 439 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRSS21Q9Y6M0 314 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 KIAA1217Q5T5P2 1943 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 SIP14410 1827 aa3.26□□□□□ -1.89
HMGB3P23-201ENST00000414981 PTPRJQ12913 1337 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 IGKV6D-21A0A0A0MT36 114 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PNMA8CA0A1B0GUJ8 204 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 LNP1A1A4G5 178 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRORSD1PA6NEY8 169 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CLDN24A6NM45 220 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SYCE1LA8MT33 242 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAM25AB3EWG3 89 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAM25CB3EWG5 89 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAM25GB3EWG6 89 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 FOXE1O00358 373 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SDHDO14521 159 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 MRASO14807 208 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SCAMP2O15127 329 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 POLR1CO15160 346 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 DFNA5O60443 496 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 GABARAPO95166 117 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PIGNO95427 931 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 KRT75O95678 551 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 AP2A1O95782 977 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 EML2O95834 649 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 H1F0P07305 194 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CAPN1P07384 714 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 F3P13726 295 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRKACAP17612 351 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 DNASE1P24855 282 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 EPHA2P29317 976 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SERPINB1P30740 379 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SDC4P31431 198 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 UGT2B10P36537 528 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 HPCAL1P37235 193 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC1A3P43003 542 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 GDI2P50395 445 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 CNN1P51911 297 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 FASTKQ14296 549 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 GK3PQ14409 553 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPR176Q14439 515 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PAFAH1B3Q15102 231 aaKnown RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 KCNJ8Q15842 424 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 NRF1Q16656 503 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 PCK2Q16822 640 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 KCTD19Q17RG1 926 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 VWC2Q2TAL6 325 aa3.25□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF699Q32M78 642 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms