RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 UFD1Q92890 307 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 SEC22AQ96IW7 307 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 IFT74Q96LB3 600 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 KIR2DL4Q99706 377 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 ANKRD19PQ9H560 264 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 PTGES2Q9H7Z7 377 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 Q9UF83 564 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 ABCG2Q9UNQ0 655 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 KCNIP3Q9Y2W7 256 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 RAI1Q7Z5J4 1906 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 LRRK1Q38SD2 2015 aa3.59□□□□□ -1.83
HMGB3P31-201ENST00000413333 K7N7A8 449 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 DCTN6O00399 190 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 MMP1P03956 469 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 P04436 131 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 TNNI1P19237 187 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 CHMLP26374 656 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 AQP1P29972 269 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 PTGDSP41222 190 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 CRYBB1P53674 252 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 PRMT2P55345 433 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 ASPHQ12797 758 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 MRPL28Q13084 256 aaKnown RBP3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 PPP1R7Q15435 360 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 PRR4Q16378 134 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 NSUN5P1Q3KNT7 163 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 CARD16Q5EG05 197 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 GPRC6AQ5T6X5 926 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 OR2G6Q5TZ20 316 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 ZNF589Q86UQ0 364 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 GPR137CQ8N3F9 429 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 OR2L3Q8NG85 312 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 OR10H4Q8NGA5 316 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 NEIL2Q969S2 332 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 NUS1Q96E22 293 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 CNN2Q99439 309 aaKnown RBP3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 CNPY3Q9BT09 278 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 PAXXQ9BUH6 204 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 C19orf24Q9BVV8 132 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 DEFB126Q9BYW3 111 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 ZNF275Q9NSD4 429 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 RAB20Q9NX57 234 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 ZNF107Q9UII5 783 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 IKZF2Q9UKS7 526 aa3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 RPL36Q9Y3U8 105 aaKnown RBP3.58□□□□□ -1.84
HMGB3P31-201ENST00000413333 GFYI3L273 518 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 HSD17B6O14756 317 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 RNF13O43567 381 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 KLHL41O60662 606 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 UPK3AO75631 287 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 LGI1O95970 557 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 TROVE2P10155 538 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 MCF2P10911 925 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 CCNCP24863 283 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 SHMT2P34897 504 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 RFC4P35249 363 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 P2RY4P51582 365 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 GPM6AP51674 278 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 PRRX1P54821 245 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 GBE1Q04446 702 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 TGM3Q08188 693 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 BST2Q10589 180 aaKnown RBP3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 OR5I1Q13606 314 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 PRAMEF20Q5VT98 475 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 METAP1DQ6UB28 335 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 PAMR1Q6UXH9 720 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 LRRC74BQ6ZQY2 392 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 CDC20BQ86Y33 519 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 NUDCD3Q8IVD9 361 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 SLC39A11Q8N1S5 342 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 TMEM252Q8N6L7 170 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 ACOT4Q8N9L9 421 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 SPATA4Q8NEY3 305 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 OR52K2Q8NGK3 314 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 RAB3IL1Q8TBN0 382 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 PLEKHA8Q96JA3 519 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 FOXN4Q96NZ1 517 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 OXGR1Q96P68 337 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 ZNF184Q99676 751 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 MRPL45Q9BRJ2 306 aaKnown RBP3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 CENPKQ9BS16 269 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 FOLH1BQ9HBA9 442 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 NT5MQ9NPB1 228 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 TREM2Q9NZC2 230 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 TRAF3IP3Q9Y228 551 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 CA5BQ9Y2D0 317 aa3.57□□□□□ -1.84
HMGB3P31-201ENST00000413333 CHD4Q14839 1912 aa3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 COL5A2P05997 1499 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 IGHV1OR15-1A0A075B7D0 117 aa3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 IGKV1D-8A0A087WSZ0 117 aa3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 A0A0G2JRQ6 117 aa3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 TMEM110-MUSTN1A8MSY1 372 aa3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 LSM1O15116 133 aaKnown RBP3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 BCL2L11O43521 198 aa3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 LYPLA1O75608 230 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 CST1P01037 141 aa3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 PABPC4LP0CB38 370 aaKnown RBP3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 NPR2P20594 1047 aa3.56□□□□□ -1.84
HMGB3P31-201ENST00000413333 ZP3P21754 424 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms