RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TRGV1A0A0A0MS02 117 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 A0A0A6YYD4 124 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 NPIPA5A0A0B4J1W7 369 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 LOC100131303A0A0U1RQF7 123 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 A0A1B0GU33 70 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 LINC00959A0A1B0GUT2 108 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SMIM9A6NGZ8 99 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 B4DSR2 109 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 H0YC42 278 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 ANGPT2O15123 496 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 RNMTO43148 476 aaKnown RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SELENOFO60613 162 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 UGT1A9O60656 530 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 MTRF1O75570 445 aaKnown RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 AKAP3O75969 853 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 PDE5AO76074 875 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR6B1O95007 311 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 PSMG1O95456 288 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 IGHG2P01859 326 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 IGHG4P01861 327 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 HLA-DQB1P01920 261 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 NMBP08949 121 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 VIL1P09327 827 aaKnown RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 ALDOCP09972 364 aaKnown RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SBK2P0C263 348 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 PRPS1L1P21108 318 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 PSMB5P28074 263 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC8A1P32418 973 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 STAT1P42224 750 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 HTR5AP47898 357 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 HINT1P49773 126 aaPredicted RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 RAP1GDS1P52306 607 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZNF121P58317 390 aaPredicted RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 STARD6P59095 220 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 PRPS1P60891 318 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 DCAF7P61962 342 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 RPS6P62753 249 aaKnown RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 RBP5P82980 135 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 GBE1Q04446 702 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 BST1Q10588 318 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 GAGE2BQ13066 116 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SNTB2Q13425 540 aaKnown RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 CUL3Q13618 768 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 NFE2L1Q14494 772 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 TMEM183BQ1AE95 376 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 MICAQ29983 383 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 KLHL40Q2TBA0 621 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 ANO4Q32M45 955 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 ADPRMQ3LIE5 342 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC25A52Q3SY17 297 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 USH1GQ495M9 461 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 UNC50Q53HI1 259 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 LRRC10Q5BKY1 277 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 RAB41Q5JT25 222 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 BROXQ5VW32 411 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 MLIPQ5VWP3 458 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 RRAGBQ5VZM2 374 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 RAB12Q6IQ22 244 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 GAGE2AQ6NT46 116 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 MED27Q6P2C8 311 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 PAPD4Q6PIY7 484 aaKnown RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 RFPL4BQ6ZWI9 263 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 PPP1R27Q86WC6 154 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 TMEM183AQ8IXX5 376 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZNF595Q8IYB9 648 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 TAGAPQ8N103 731 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 C9orf62Q8N4C0 152 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 FAM71CQ8NEG0 241 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR4X2Q8NGF9 303 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR8B12Q8NGG6 310 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR10G9Q8NGN4 311 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR4C13Q8NGP0 309 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR8K5Q8NH50 307 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR52N5Q8NH56 324 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 M1APQ8TC57 530 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 HM13Q8TCT9 377 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 COG1Q8WTW3 980 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 TBC1D22AQ8WUA7 517 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 FAM46BQ96A09 425 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 ORAI1Q96D31 301 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 YIPF6Q96EC8 236 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OXNAD1Q96HP4 312 aaPredicted RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 C9orf85Q96MD7 179 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 GCNAQ96QF7 691 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR8B2Q96RD0 313 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 HIST1H4GQ99525 98 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 TTYH2Q9BSA4 534 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SARGQ9BW04 601 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 AICDAQ9GZX7 198 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 BRD8Q9H0E9 1235 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SIRPDQ9H106 197 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 LRMDAQ9H2I8 198 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC25A22Q9H936 323 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 C12orf10Q9HB07 376 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 NDRG3Q9UGV2 375 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 LUC7L2Q9Y383 392 aaKnown RBP-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 FAM96BQ9Y3D0 163 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SNX13Q9Y5W8 968 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 SPTBP11277 2137 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 CASP8AP2Q9UKL3 1982 aa-2.05□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms