RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 KIR2DS3K7RE56 304 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 DENRO43583 198 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 CDC14BO60729 498 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 WNT11O96014 354 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 PKLRP30613 574 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 MRPS21P82921 87 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 KIR2DS5Q14953 304 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ARHGAP11BQ3KRB8 267 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 TMPRSS11FQ6ZWK6 438 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 OR10AD1Q8NGE0 317 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 UTP4Q969X6 686 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SAMD10Q9BYL1 202 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ZMAT3Q9HA38 289 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 IGKV3-7A0A075B6H7 116 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM269A0A1B0GVZ9 245 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 C4orf47A7E2U8 309 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RNASET2O00584 256 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 MITFO75030 526 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 CLDN1O95832 211 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 GAAP10253 952 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 GM2AP17900 193 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 CD1CP29017 333 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 KIR2DL3P43628 341 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SH3BP2P78314 561 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 OR1Q1Q15612 314 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 MANEALQ5VSG8 457 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SCRN2Q96FV2 425 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 OTOFQ9HC10 1997 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 AQP12BA6NM10 295 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 NPC1O15118 1278 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ADAM23O75077 832 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SLITRK5O94991 958 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 OPN5Q6U736 354 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ZDHHC24Q6UX98 284 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 OR7G3Q8NG95 312 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 PIGTQ969N2 578 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 FBXO17Q96EF6 278 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ARSGQ96EG1 525 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 FYTTD1Q96QD9 318 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 FGF21Q9NSA1 209 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 NUP98P52948 1817 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 NALCNQ8IZF0 1738 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 A6NIZ1 184 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF593O00488 134 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 CRXO43186 299 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 PCSK2P16519 638 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 PCGF2P35227 344 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 NKX2-5P52952 324 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RAP1BP61224 184 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RAP1AP62834 184 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RPE65Q16518 533 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 PAPD4Q6PIY7 484 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM179BQ7Z7N9 219 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SLC39A11Q8N1S5 342 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 BOD1Q96IK1 185 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 UBQLN2Q9UHD9 624 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ADAMTS6Q9UKP5 1117 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 NPFFR2Q9Y5X5 522 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 TCAPO15273 167 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SPATA46Q5T0L3 261 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 GRPEL2Q8TAA5 225 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 UCN3Q969E3 161 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RBMXL1Q96E39 390 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 HAPLN2Q9GZV7 340 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 BARX1Q9HBU1 254 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RNF150Q9ULK6 438 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 DUOX1Q9NRD9 1551 aa7.84□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF705GA8MUZ8 300 aaPredicted RBP7.84□□□□□ -1.16
SCN9A-203ENST00000409672 MCRIP1C9JLW8 97 aa7.84□□□□□ -1.16
SCN9A-203ENST00000409672 SPHARQ15513 63 aa7.84□□□□□ -1.16
SCN9A-203ENST00000409672 SLC22A10Q63ZE4 541 aa7.84□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF813Q6ZN06 617 aa7.84□□□□□ -1.16
SCN9A-203ENST00000409672 CACNA1CQ13936 2221 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ATRNO75882 1429 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 K7EPK0 472 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 TRAF3IP2O43734 574 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 SC5DO75845 299 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 SORBS2O94875 1100 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 NDUFB2O95178 105 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 MT-ND2P03891 347 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 RETP07949 1114 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ATP6AP1Q15904 470 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 MRPL2Q5T653 305 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 SLC6A19Q695T7 634 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 FAM71E2Q8N5Q1 922 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 PHOSPHO2Q8TCD6 241 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 FOXRED1Q96CU9 486 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 OR14A2Q96R54 314 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 SSUH2Q9Y2M2 353 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 MRC1P22897 1456 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 A0A1W2PR80 420 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 RAB13P51153 203 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 HADHBP55084 474 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 GTDC1Q4AE62 458 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 TLDC1Q6P9B6 456 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 FAM111BQ6SJ93 734 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 YTHDF3Q7Z739 585 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 CXorf67Q86X51 503 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 BEST4Q8NFU0 473 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 REEP6Q96HR9 211 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms