RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CLDND2Q8NHS1 167 aa14.43□□□□□ -0.1
CHMP3-203ENST00000409225 PSMA8Q8TAA3 256 aa14.43□□□□□ -0.1
CHMP3-203ENST00000409225 SFXN5Q8TD22 340 aa14.43□□□□□ -0.1
CHMP3-203ENST00000409225 TMEM45BQ96B21 275 aa14.43□□□□□ -0.1
CHMP3-203ENST00000409225 LRRC37BQ96QE4 947 aa14.43□□□□□ -0.1
CHMP3-203ENST00000409225 JMJD8Q96S16 334 aa14.43□□□□□ -0.1
CHMP3-203ENST00000409225 ZNF696Q9H7X3 374 aa14.43□□□□□ -0.1
CHMP3-203ENST00000409225 EMCNQ9ULC0 261 aa14.43□□□□□ -0.1
CHMP3-203ENST00000409225 TMEM129A0AVI4 362 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 VSTM5A8MXK1 200 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 LSM1O15116 133 aaKnown RBP14.42□□□□□ -0.1
CHMP3-203ENST00000409225 MSMBP08118 114 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 IGFBP1P08833 259 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-203ENST00000409225 FKBP2P26885 142 aaKnown RBP14.42□□□□□ -0.1
CHMP3-203ENST00000409225 PGM1P36871 562 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 KHKP50053 298 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 ARFIP2P53365 341 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 NAA20P61599 178 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 MAPK14Q16539 360 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 FAHD2BQ6P2I3 314 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-203ENST00000409225 ABHD12BQ7Z5M8 362 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-203ENST00000409225 ZIC4Q8N9L1 334 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 CKAP2Q8WWK9 683 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 FAHD2AQ96GK7 314 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 BOD1Q96IK1 185 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 ZNF385AQ96PM9 386 aaKnown RBP14.42□□□□□ -0.1
CHMP3-203ENST00000409225 TUBB1Q9H4B7 451 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 SERHL2Q9H4I8 314 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 ZNF442Q9H7R0 627 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 CRNNQ9UBG3 495 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-203ENST00000409225 TMED5Q9Y3A6 229 aa14.42□□□□□ -0.1
CHMP3-203ENST00000409225 A0A096LPE4 126 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 TMED7-TICAM2A0A0A6YYA0 188 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 A0A1W2PPZ6 126 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 TMEM72A0PK05 275 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 ZNF587BE7ETH6 402 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 AZIN1O14977 448 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 CFLARO15519 480 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 CELA3BP08861 270 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 MATN1P21941 496 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 GPR6P46095 362 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-203ENST00000409225 LIMS1P48059 325 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 LSM12Q3MHD2 195 aaKnown RBP14.41□□□□□ -0.1
CHMP3-203ENST00000409225 OTUD3Q5T2D3 398 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-203ENST00000409225 EMBQ6PCB8 327 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 CARM1Q86X55 608 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 PIP4P2Q8N4L2 257 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 FAM71CQ8NEG0 241 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 OR9K2Q8NGE7 335 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 BCL2L2Q92843 193 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-203ENST00000409225 MOAP1Q96BY2 351 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 DDIT4LQ96D03 193 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 ANKRD27Q96NW4 1050 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 ZNF350Q9GZX5 532 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 TREM2Q9NZC2 230 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 GIMAP2Q9UG22 337 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 SLC35A3Q9Y2D2 325 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 TMED7Q9Y3B3 224 aa14.41□□□□□ -0.1
CHMP3-203ENST00000409225 NUP214P35658 2090 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-203ENST00000409225 CMYA5Q8N3K9 4069 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 LOC105371242A0A075B767 164 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 ARPC4-TTLL3A0A0A6YYG9 625 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 AK1P00568 194 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 IGLV1-44P01699 117 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 SAGP10523 405 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-203ENST00000409225 RPL3P39023 403 aaKnown RBP14.4□□□□□ -0.1
CHMP3-203ENST00000409225 IDH2P48735 452 aaKnown RBP14.4□□□□□ -0.1
CHMP3-203ENST00000409225 ARHGAP11BQ3KRB8 267 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 C3orf36Q3SXR2 165 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 ATP6AP1LQ52LC2 224 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 PAQR6Q6TCH4 344 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 C16orf62Q7Z3J2 963 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 HMGN2P46Q86SG4 172 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 GPAT4Q86UL3 456 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 MYPOPQ86VE0 399 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-203ENST00000409225 DDIASQ8IXT1 998 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 CLEC4FQ8N1N0 589 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 TMEM99Q8N816 258 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 OR51F2Q8NH61 342 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 IFT81Q8WYA0 676 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 ALKBH3Q96Q83 286 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-203ENST00000409225 FMO2Q99518 471 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 ZNF747Q9BV97 191 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 TSPYL1Q9H0U9 437 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 PCDHGB4Q9UN71 923 aa14.4□□□□□ -0.1
CHMP3-203ENST00000409225 OR6C65A6NJZ3 312 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 DUXAA6NLW8 204 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 WNT9BO14905 357 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 AKR7A3O95154 331 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 PNPP00491 289 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 TFP02787 698 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 GAAP10253 952 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 PAX7P23759 505 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 CASQ1P31415 396 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 HTR3AP46098 478 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 DNAJB13P59910 316 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 FAM153CQ494X1 144 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 SHISA2Q6UWI4 295 aa14.39□□□□□ -0.11
CHMP3-203ENST00000409225 C1orf229Q6ZS94 237 aaPredicted RBP14.39□□□□□ -0.11
CHMP3-203ENST00000409225 LINGO2Q7L985 606 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms