RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 DOK1Q99704 481 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SLC6A7Q99884 636 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ELAC2Q9BQ52 826 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 HOXD1Q9GZZ0 328 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 PIGUQ9H490 435 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SERINC1Q9NRX5 453 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SIRT3Q9NTG7 399 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 FBXO9Q9UK97 447 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ZNF281Q9Y2X9 895 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 DTNAQ9Y4J8 743 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 FLVCR1Q9Y5Y0 555 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 LOC105371242A0A075B767 164 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 EIF4E2O60573 245 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 DNAJA2O60884 412 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 PMS2P2O95744 297 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 PNPP00491 289 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 AVPP01185 164 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 HMGN2P05204 90 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ARAFP10398 606 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 CDH2P19022 906 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 EFNA1P20827 205 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ETV4P43268 484 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ASMTP46597 345 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 UBA52P62987 128 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 IL1RL1Q01638 556 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 HHATQ5VTY9 493 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 CDK20Q8IZL9 346 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 TCP10LQ8TDR4 215 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 BOD1Q96IK1 185 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 THUMPD3Q9BV44 507 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SUCNR1Q9BXA5 334 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 IQCGQ9H095 443 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ZNF442Q9H7R0 627 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SEC61A2Q9H9S3 476 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 ARMCX1Q9P291 453 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 SLC9A8Q9Y2E8 581 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
CHRNA1-203ENST00000409219 TMEM129A0AVI4 362 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 TRIM49D1C9J1S8 452 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 NPIPB8E9PQR5 432 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 WNT9BO14905 357 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 RSL1D1O76021 490 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 CECR9P0C854 216 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 HKR1P10072 659 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 TFPIP10646 304 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 MAGEA8P43361 318 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 PKNOX1P55347 436 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 HGFACQ04756 655 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 FOXL1Q12952 345 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 LCP2Q13094 533 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 FAHD2BQ6P2I3 314 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 SPATA21Q7Z572 469 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 NUP37Q8NFH4 326 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 OR51F2Q8NH61 342 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 PPCDCQ96CD2 204 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 FAHD2AQ96GK7 314 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 RACGAP1Q9H0H5 632 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 TPK1Q9H3S4 243 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 DYNLRB1Q9NP97 96 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 OBP2BQ9NPH6 170 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 ACSS1Q9NUB1 689 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 ZCCHC3Q9NUD5 404 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 STK38LQ9Y2H1 464 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 ARL2BPQ9Y2Y0 163 aa11.11□□□□□ -0.63
CHRNA1-203ENST00000409219 CENPVL1A0A0U1RR11 272 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 SH3PXD2BA1X283 911 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 AKAP10O43572 662 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 DNPH1O43598 174 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 TBX19O60806 448 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 EDF1O60869 148 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 TFP02787 698 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 GSTA1P08263 222 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 GAAP10253 952 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 SAGP10523 405 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 THBS4P35443 961 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 H3F3AP84243 136 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 PDE7AQ13946 482 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 KIAA0040Q15053 153 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 TBRG1Q3YBR2 411 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 ELFN2Q5R3F8 820 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 PDZK1Q5T2W1 519 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 CGB2Q6NT52 195 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 ANKRD16Q6P6B7 361 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 MYPOPQ86VE0 399 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 OR4F15Q8NGB8 312 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 LRRC8CQ8TDW0 803 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 ACMSDQ8TDX5 336 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 CCDC106Q9BWC9 280 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 OR11A1Q9GZK7 315 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 REEP4Q9H6H4 257 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 G6PC2Q9NQR9 355 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 CTPS2Q9NRF8 586 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 ACER3Q9NUN7 267 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 PARPBPQ9NWS1 579 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 CRNNQ9UBG3 495 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 CHRNA9Q9UGM1 479 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 HDGFL3Q9Y3E1 203 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
CHRNA1-203ENST00000409219 TRAV20A0A0B4J274 112 aa11.09□□□□□ -0.63
CHRNA1-203ENST00000409219 CYP7B1O75881 506 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms