RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TRDV1A0A1B0GX56 115 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 RIIAD1A6NNX1 92 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 KCNK2O95069 426 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 TIAF1O95411 115 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 IGHA1P01876 353 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 HBQ1P09105 142 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 PTBP1P26599 531 aaKnown RBP eCLIP11.82□□□□□ -0.522e-9■■■■■ 39.5
SMARCB1-203ENST00000407082 LCN1P31025 176 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC6A6P31641 620 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 SOX3P41225 446 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC1A3P43003 542 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 GPR4P46093 362 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 GCGRP47871 477 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 ATP12AP54707 1039 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 TAS2R43P59537 309 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 RPS3AP61247 264 aaKnown RBP11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 ID2Q02363 134 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 GRM7Q14831 915 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF141Q15928 474 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 LIPKQ5VXJ0 399 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 MZT2AQ6P582 158 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 SMARCD3Q6STE5 483 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 RTL4Q6ZR62 310 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 MEPCEQ7L2J0 689 aaKnown RBP11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 WDR53Q7Z5U6 358 aaPredicted RBP11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC22A16Q86VW1 577 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 LYSMD2Q8IV50 215 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 GPALPP1Q8IXQ4 340 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 LNX2Q8N448 690 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 PARP16Q8N5Y8 322 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 LSMEM1Q8N8F7 131 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 POC5Q8NA72 575 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 GALNT11Q8NCW6 608 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 OR8D4Q8NGM9 314 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 OR9A4Q8NGU2 314 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 CPT1CQ8TCG5 803 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 DNAJA4Q8WW22 397 aaPredicted RBP11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 C1GALT1C1Q96EU7 318 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 SAMD8Q96LT4 415 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 PRSS27Q9BQR3 290 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 NDC1Q9BTX1 674 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 OR52D1Q9H346 318 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 UBQLN3Q9H347 655 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 ABCB10Q9NRK6 738 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 TXNL4BQ9NX01 149 aaKnown RBP11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 KLHL21Q9UJP4 597 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF223Q9UK11 482 aaPredicted RBP11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC35A3Q9Y2D2 325 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 MRPS2Q9Y399 296 aaKnown RBP11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 CMAHPQ9Y471 501 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 MMACHCQ9Y4U1 282 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 PCDHGB6Q9Y5F9 930 aa11.82□□□□□ -0.52
SMARCB1-203ENST00000407082 C2CD3Q4AC94 2353 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC35F4A4IF30 521 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 FITM1A5D6W6 292 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 PRR23D1E9PI22 279 aaPredicted RBP11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 STK17BO94768 372 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 CBX7O95931 251 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 PRR23D2P0DMB1 279 aaPredicted RBP11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF28P17035 718 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF3P17036 446 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ALAS2P22557 587 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 SDC2P34741 201 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 TGFBR1P36897 503 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 GAS1P54826 345 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 RIPPLY3P57055 190 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 EXOSC7Q15024 291 aaKnown RBP11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 CRTC2Q53ET0 693 aaPredicted RBP11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 CLEC12AQ5QGZ9 265 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 CCNJQ5T5M9 372 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC30A6Q6NXT4 461 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ARHGAP11AQ6P4F7 1023 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ULK3Q6PHR2 472 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 FIGNL1Q6PIW4 674 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ACBD7Q8N6N7 88 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF527Q8NB42 609 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 OR5T3Q8NGG3 340 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 OR4Q3Q8NH05 313 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC25A46Q96AG3 418 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 BPIFA2Q96DR5 249 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 CLIP3Q96DZ5 547 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 MVB12AQ96EY5 273 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 PRR14Q9BWN1 585 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 KCNN2Q9H2S1 579 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 MKKSQ9NPJ1 570 aaPredicted RBP11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ENAMQ9NRM1 1142 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 CMC2Q9NRP2 79 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 POLHQ9Y253 713 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 PCDHGB7Q9Y5F8 929 aa11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 MRPS18BQ9Y676 258 aaKnown RBP11.81□□□□□ -0.52
SMARCB1-203ENST00000407082 ESPL1Q14674 2120 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 A0A0A6YYC8 382 aaPredicted RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 A0A0B4J2E0 115 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 A0A1B0GX12 115 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 I3L1I5 382 aaPredicted RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 RGS5O15539 181 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 TBX1O43435 398 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 CPNE3O75131 537 aaKnown RBP11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 CDRT1O95170 752 aa11.8□□□□□ -0.52
SMARCB1-203ENST00000407082 SAGP10523 405 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms