RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ERVK-25P63136 954 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 EFR3AQ14156 821 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 IL11RAQ14626 422 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 MOSPD2Q8NHP6 518 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 SMPDL3BQ92485 455 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 MESP1Q9BRJ9 268 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 ISG20L2Q9H9L3 353 aaKnown RBP22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 ADGRL4Q9HBW9 690 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 NRIP3Q9NQ35 241 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 BABAM2Q9NXR7 383 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 TECTAO75443 2155 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 SULT1C4O75897 302 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 IL1AP01583 271 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 CD40LGP29965 261 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 BDH1Q02338 343 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 EGR4Q05215 589 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 LGALS3BPQ08380 585 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 CBFBQ13951 182 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 ISXQ2M1V0 245 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 MOGAT1Q96PD6 335 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 CRB3Q9BUF7 120 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 KATNB1Q9BVA0 655 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 MMP25Q9NPA2 562 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 KLHL1Q9NR64 748 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 MEN1O00255 615 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 NTN3O00634 580 aaPredicted RBP22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 LRRTM2O43300 516 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 CDC40O60508 579 aaKnown RBP eCLIP22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 AQP2P41181 271 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 FABP5Q01469 135 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 TRA2AQ13595 282 aaKnown RBP eCLIP22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 ATP1A4Q13733 1029 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 TOMM34Q15785 309 aaPredicted RBP22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 LCN10Q6JVE6 187 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 CPEB2Q7Z5Q1 589 aaKnown RBP22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 THAP3Q8WTV1 239 aaPredicted RBP22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 CHPT1Q8WUD6 406 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 GPX7Q96SL4 187 aaPredicted RBP22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 LPAR4Q99677 370 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 TMED9Q9BVK6 235 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 PPIEQ9UNP9 301 aaKnown RBP22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 HIF3AQ9Y2N7 669 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 SLC6A5Q9Y345 797 aa22.47■■□□□ 1.19
DNMT3A-206ENST00000406659 TRBV11-1A0A0K0K1C0 115 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 TRDV1A0A1B0GX56 115 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 TMEM221A6NGB7 291 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 C17orf51A8MQB3 221 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 M0R296 226 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 CPNE3O75131 537 aaKnown RBP22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 HIST1H2ABP04908 130 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 P2RX1P51575 399 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 ZNF45Q02386 682 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 MXD1Q05195 221 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 RUNX1T1Q06455 604 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 LPAL2Q16609 132 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 LCN1P1Q5VSP4 162 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 CD200R1LQ6Q8B3 271 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 C16orf47Q6ZP98 133 aaPredicted RBP22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 DCDC5Q6ZRR9 648 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 HIST3H2AQ7L7L0 130 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 NUP54Q7Z3B4 507 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 CENPSQ8N2Z9 138 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 NUBPLQ8TB37 319 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 HIST1H2ACQ93077 130 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 KTI12Q96EK9 354 aaPredicted RBP22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 COQ7Q99807 217 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 BARHL1Q9BZE3 327 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 NDEL1Q9GZM8 345 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 SLC26A1Q9H2B4 701 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 TPK1Q9H3S4 243 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 ASB6Q9NWX5 421 aa22.46■■□□□ 1.19
DNMT3A-206ENST00000406659 MT-ND5P03915 603 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 HLA-DPB1P04440 258 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 FGF9P31371 208 aaPredicted RBP22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 ACTC1P68032 377 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 ACTA1P68133 377 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 POMZP3Q6PJE2 187 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 NPEPL1Q8NDH3 523 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 AGBL5Q8NDL9 886 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 ZMYND19Q96E35 227 aaPredicted RBP22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 SPSB2Q99619 263 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 SMURF1Q9HCE7 757 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 GALNT8Q9NY28 637 aa22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 C19orf25Q9UFG5 118 aaPredicted RBP22.45■■□□□ 1.19
DNMT3A-206ENST00000406659 COL6A3P12111 3177 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 MAGEB3O15480 346 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 ASAH2BP0C7U1 165 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 LTBQ06643 244 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 GPR50Q13585 617 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 PON3Q15166 354 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 ALG10Q5BKT4 473 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 B4GALNT2Q8NHY0 566 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 DUSP19Q8WTR2 217 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 ABTB1Q969K4 478 aaPredicted RBP22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 TAAR8Q969N4 342 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 RASD2Q96D21 266 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 COX4I2Q96KJ9 171 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 CEP19Q96LK0 163 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 NMNAT3Q96T66 252 aa22.45■■□□□ 1.18
DNMT3A-206ENST00000406659 TIMP4Q99727 224 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms