RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 HMGA2P52926 109 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 UGT2B15P54855 530 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 RBPJQ06330 500 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 LTBQ06643 244 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 TRAM2Q15035 370 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 SEC23BQ15437 767 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 C1orf140Q5VVS0 124 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 HBMQ6B0K9 141 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 MEIOBQ8N635 442 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 OR2V1Q8NHB1 315 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 ZPLD1Q8TCW7 415 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 TMEM239Q8WW34 195 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 TMEM43Q9BTV4 400 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 C20orf141Q9NUB4 165 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 ARMC1Q9NVT9 282 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 SH3BGRL2Q9UJC5 107 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 HDGFL3Q9Y3E1 203 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 AP4S1Q9Y587 144 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 FAM215AQ9Y5M1 114 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 SPIN1Q9Y657 262 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-204ENST00000401473 FREM1Q5H8C1 2179 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 GJE1A6NN92 205 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 TIPRLO75663 272 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 CST1P01037 141 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 IFNA8P32881 189 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 OR2T5Q6IEZ7 315 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 PODNL1Q6PEZ8 512 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 TTC33Q6PID6 262 aaPredicted RBP14.29□□□□□ -0.12
HMGA1-204ENST00000401473 SEM1Q6ZVN7 128 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 ATCAYQ86WG3 371 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 OR2T29Q8NH02 315 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 PFN4Q8NHR9 129 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 U3KQV3 271 aa14.29□□□□□ -0.12
HMGA1-204ENST00000401473 CLCA1A8K7I4 914 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 FTCDNL1E5RQL4 147 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 H0Y3Z8 333 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 SULT2B1O00204 365 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 KPNA4O00629 521 aaPredicted RBP14.28□□□□□ -0.12
HMGA1-204ENST00000401473 GADD45GO95257 159 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 TGM6O95932 706 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 STSP08842 583 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 FPR1P21462 350 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 ENPP1P22413 925 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 LIMS1P48059 325 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 IST1P53990 364 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 RAC3P60763 192 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 SPIBQ01892 262 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 SGCBQ16585 318 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 RPTNQ6XPR3 784 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 PRR7Q8TB68 274 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 MOGAT1Q96PD6 335 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 TRAPPC4Q9Y296 219 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 LYVE1Q9Y5Y7 322 aa14.28□□□□□ -0.12
HMGA1-204ENST00000401473 LIPT2A6NK58 231 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 ZNF814B7Z6K7 855 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 H3BNX3 289 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 PMS2P2O95744 297 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 CBLP22681 906 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 ACVR2AP27037 513 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 RBM34P42696 430 aaKnown RBP14.27□□□□□ -0.12
HMGA1-204ENST00000401473 H3F3AP84243 136 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 PON3Q15166 354 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 ACSF3Q4G176 576 aaPredicted RBP14.27□□□□□ -0.12
HMGA1-204ENST00000401473 FGD3Q5JSP0 725 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 MEX3DQ86XN8 651 aaKnown RBP14.27□□□□□ -0.12
HMGA1-204ENST00000401473 FNDC9Q8TBE3 224 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 ACOT11Q8WXI4 607 aaPredicted RBP14.27□□□□□ -0.12
HMGA1-204ENST00000401473 ROBO4Q8WZ75 1007 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 HS6ST2Q96MM7 605 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 UCN2Q96RP3 112 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 TRIB1Q96RU8 372 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 ANKRD19PQ9H560 264 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 NTN4Q9HB63 628 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 SEC14L4Q9UDX3 406 aa14.27□□□□□ -0.12
HMGA1-204ENST00000401473 TRAV36DV7A0A075B6V5 113 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 IGHV3-15A0A0B4J1V0 119 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 TRGV8A0A0C4DH27 118 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 FIGNL2A6NMB9 653 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 PIP5K1CO60331 668 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 WDR1O75083 606 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 KRT36O76013 467 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 AQP8O94778 261 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 GABRA1P14867 456 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 CA7P43166 264 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 RPS3AP61247 264 aaKnown RBP14.27□□□□□ -0.13
HMGA1-204ENST00000401473 LAPTM4AQ15012 233 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 OR7A5Q15622 319 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 FAM69AQ5T7M9 428 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 NCCRP1Q6ZVX7 275 aaPredicted RBP14.27□□□□□ -0.13
HMGA1-204ENST00000401473 ZNF771Q7L3S4 317 aaPredicted RBP14.27□□□□□ -0.13
HMGA1-204ENST00000401473 TMEM179BQ7Z7N9 219 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 NRMQ8IXM6 262 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 LRRC17Q8N6Y2 441 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 OR4C15Q8NGM1 316 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 MFSD8Q8NHS3 518 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 SLC25A36Q96CQ1 311 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 ALPK1Q96QP1 1244 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 SLC19A3Q9BZV2 496 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 CLCF1Q9UBD9 225 aa14.27□□□□□ -0.13
HMGA1-204ENST00000401473 SPTAN1Q13813 2472 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms