RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 TRIM36Q9NQ86 728 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 NANSQ9NR45 359 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 HIF3AQ9Y2N7 669 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 LAMA1P25391 3075 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 AGRPO00253 132 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 UPK1BO75841 260 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 MT-ND5P03915 603 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 MRPL3P09001 348 aaKnown RBP23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 GAAP10253 952 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 PGCP20142 388 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 GALP22466 123 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 DUSP3P51452 185 aaPredicted RBP23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 ZNF181Q2M3W8 571 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 CCDC190Q86UF4 302 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 GPALPP1Q8IXQ4 340 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 PARP16Q8N5Y8 322 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 GFM1Q96RP9 751 aaKnown RBP23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 RTN4RQ9BZR6 473 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 NDEL1Q9GZM8 345 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 ISG20L2Q9H9L3 353 aaKnown RBP23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 MMP25Q9NPA2 562 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 FBXL4Q9UKA2 621 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 SLC6A5Q9Y345 797 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 ADAM18Q9Y3Q7 739 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 MUC3AQ02505 3323 aa23.5■■□□□ 1.35
SHARPIN-202ENST00000398712 NCOR1O75376 2440 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 IGHV3-20A0A0C4DH32 117 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 IQCMA0A1B0GVH7 501 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 OR6C70A6NIJ9 312 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 CDC40O60508 579 aaKnown RBP eCLIP23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 GYPBP06028 91 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 ITPKBP27987 946 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 TBC1D25Q3MII6 688 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 BPHLQ86WA6 291 aaPredicted RBP23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 POMGNT2Q8NAT1 580 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 OR5W2Q8NH69 310 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 TMED9Q9BVK6 235 aa23.49■■□□□ 1.35
SHARPIN-202ENST00000398712 ISPDA4D126 451 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 EVI2BP34910 448 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 MXD1Q05195 221 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 CBFBQ13951 182 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 OXA1LQ15070 435 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 PHF19Q5T6S3 580 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 ZNF385CQ66K41 422 aaPredicted RBP23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 SNX29P2Q8IUI4 249 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 ARIH2OSQ8N7S6 290 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 NFAM1Q8NET5 270 aaPredicted RBP23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 KATNB1Q9BVA0 655 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 TPK1Q9H3S4 243 aa23.48■■□□□ 1.35
SHARPIN-202ENST00000398712 LOC110117498-PIK3R3F6TDL0 507 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 CTDSP2O14595 271 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 FADS1O60427 444 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 GP1BBP13224 206 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 APEHP13798 732 aaKnown RBP23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 CXCR1P25024 350 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 EMP2P54851 167 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 TAS2R43P59537 309 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 EGR4Q05215 589 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 EFR3AQ14156 821 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 GGTLC2Q14390 218 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 OR2I1PQ8NGU4 316 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 TIMP4Q99727 224 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 QPCTLQ9NXS2 382 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 PPIEQ9UNP9 301 aaKnown RBP23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 VSTM2BA6NLU5 285 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 BLOC1S5-TXNDC5H3BN57 136 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 GABRPO00591 440 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 LRRTM2O43300 516 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 NUDT14O95848 222 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 ASAH2BP0C7U1 165 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 SDC2P34741 201 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 FOXL2P58012 376 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 ERVK-25P63136 954 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 HNRNPA0Q13151 305 aaKnown RBP23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 GXYLT1Q4G148 440 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 SLC35D3Q5M8T2 416 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 APCDD1LQ8NCL9 501 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 MOSPD2Q8NHP6 518 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 MOGAT1Q96PD6 335 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 DEPDC7Q96QD5 511 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 SLC30A2Q9BRI3 323 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 KLHL1Q9NR64 748 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 POLHQ9Y253 713 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 UGT2A1Q9Y4X1 527 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 NOX1Q9Y5S8 564 aa23.47■■□□□ 1.35
SHARPIN-202ENST00000398712 TTC28Q96AY4 2481 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 PATE3B3GLJ2 98 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 RGS5O15539 181 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 RNF13O43567 381 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 AQP2P41181 271 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 P2RX1P51575 399 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 PON3Q15166 354 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 TRIM61Q5EBN2 209 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 NPEPL1Q8NDH3 523 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 NUBPLQ8TB37 319 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 ZNF524Q96C55 264 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 PPP1R14BQ96C90 147 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 CNN2Q99439 309 aaKnown RBP23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 ETAA1Q9NY74 926 aa23.46■■□□□ 1.35
SHARPIN-202ENST00000398712 ZNF229Q9UJW7 825 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms