RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SLC35F4A4IF30 521 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 CFAP73A6NFT4 308 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 RNASET2O00584 256 aaKnown RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 GPR171O14626 319 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 ANKRD28O15084 1053 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 DNPH1O43598 174 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 KIAA0513O60268 411 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 LMX1BO60663 402 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 SKAP2O75563 359 aaPredicted RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 DNAJC8O75937 253 aaPredicted RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 BPGMP07738 259 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 USF1P22415 310 aaPredicted RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 APOBEC3AP31941 199 aaPredicted RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 THBS2P35442 1172 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 SOAT1P35610 550 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 CLK1P49759 484 aaKnown RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 OR2B6P58173 313 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 KCNJ10P78508 379 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 SRSF2Q01130 221 aaKnown RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 TSPO2Q5TGU0 170 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 C9orf135Q5VTT2 229 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 LRRC34Q8IZ02 419 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 DEPDC4Q8N2C3 294 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 ANKRD42Q8N9B4 389 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 ZIC4Q8N9L1 334 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 ZNF563Q8TA94 476 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 PIGXQ8TBF5 258 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 CKAP2Q8WWK9 683 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 OIT3Q8WWZ8 545 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 CNOT9Q92600 299 aaKnown RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 ROPN1LQ96C74 230 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 TUBGCP3Q96CW5 907 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 SLC35G5Q96KT7 338 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 MAGEB18Q96M61 343 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
TFF3-202ENST00000398431 ASIC5Q9NY37 505 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 TMEM181Q9P2C4 612 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 SLC35A3Q9Y2D2 325 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
TFF3-202ENST00000398431 NBEAL1Q6ZS30 2694 aa10.52□□□□□ -0.72
TFF3-202ENST00000398431 RNF103-CHMP3A0A140T963 221 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 TMEM72A0PK05 275 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 AP3D1O14617 1153 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 BIRC5O15392 142 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 ITM2AO43736 263 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 ZNF16P17020 682 aaPredicted RBP10.52□□□□□ -0.73
TFF3-202ENST00000398431 CCNA2P20248 432 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 IGFBP5P24593 272 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 FKBP2P26885 142 aaKnown RBP10.52□□□□□ -0.73
TFF3-202ENST00000398431 SERPINB5P36952 375 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 MAGEA8P43361 318 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 IDH2P48735 452 aaKnown RBP10.52□□□□□ -0.73
TFF3-202ENST00000398431 SLC17A1Q14916 467 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 SAXO2Q658L1 398 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 TNFAIP8L2Q6P589 184 aaPredicted RBP10.52□□□□□ -0.73
TFF3-202ENST00000398431 C16orf62Q7Z3J2 963 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 OR8J2Q8NGG1 315 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 ZHX1-C8orf76Q96EF9 292 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 BOD1Q96IK1 185 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 PRR14Q9BWN1 585 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 SHARPINQ9H0F6 387 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 EXOSC3Q9NQT5 275 aaKnown RBP10.52□□□□□ -0.73
TFF3-202ENST00000398431 POLE3Q9NRF9 147 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 EXD2Q9NVH0 621 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 LPAR3Q9UBY5 353 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 DCTN4Q9UJW0 460 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 OSGIN1Q9UJX0 560 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 ARL2BPQ9Y2Y0 163 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 WDR45Q9Y484 360 aa10.52□□□□□ -0.73
TFF3-202ENST00000398431 SPIN1Q9Y657 262 aaPredicted RBP10.52□□□□□ -0.73
TFF3-202ENST00000398431 TMED7-TICAM2A0A0A6YYA0 188 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 PRSS51A0A1B0GVH4 220 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 ZC3H12DA2A288 527 aaKnown RBP10.51□□□□□ -0.73
TFF3-202ENST00000398431 ATP6V1G2-DDX39BF2Z307 99 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 CPSF4O95639 269 aaKnown RBP10.51□□□□□ -0.73
TFF3-202ENST00000398431 UQCRC2P22695 453 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 CHRNB3Q05901 458 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 SMU1Q2TAY7 513 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 IL17RELQ6ZVW7 336 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 TRPM8Q7Z2W7 1104 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 ANKRD46Q86W74 232 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 C17orf78Q8N4C9 275 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 C1orf162Q8NEQ5 155 aaPredicted RBP10.51□□□□□ -0.73
TFF3-202ENST00000398431 OR4A15Q8NGL6 344 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 MGARPQ8TDB4 240 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 MSI2Q96DH6 328 aaKnown RBP10.51□□□□□ -0.73
TFF3-202ENST00000398431 C20orf27Q9GZN8 174 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 AKTIPQ9H8T0 292 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.51□□□□□ -0.73
TFF3-202ENST00000398431 PARPBPQ9NWS1 579 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 NOP53Q9NZM5 478 aaKnown RBP10.51□□□□□ -0.73
TFF3-202ENST00000398431 KLHL14Q9P2G3 628 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 MOKQ9UQ07 419 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 AMDHD2Q9Y303 409 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 TMED7Q9Y3B3 224 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 PMF1-BGLAPU3KQ54 211 aa10.51□□□□□ -0.73
TFF3-202ENST00000398431 HMGN4O00479 90 aa10.5□□□□□ -0.73
TFF3-202ENST00000398431 ZNF208O43345 1280 aa10.5□□□□□ -0.73
TFF3-202ENST00000398431 SNX3O60493 162 aa10.5□□□□□ -0.73
TFF3-202ENST00000398431 EIF1BO60739 113 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms