RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 METRNQ9UJH8 293 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 CSPG4Q6UVK1 2322 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 TRIM64A6NGJ6 449 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 TRIM64BA6NI03 449 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 AGAP5A6NIR3 686 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 H3BML4 177 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 KIAA0513O60268 411 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 AQP8O94778 261 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 GOSR1O95249 250 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 BAG2O95816 211 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 THBDP07204 575 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 THBS1P07996 1170 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 PABPC4LP0CB38 370 aaKnown RBP9.25□□□□□ -0.93
NEDD8-202ENST00000396828 PEPDP12955 493 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 HPGDP15428 266 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 PRKAR1BP31321 381 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 UGT2B10P36537 528 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 CD79BP40259 229 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 SLC6A8P48029 635 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 KCNJ5P48544 419 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 GUSBP1Q15486 140 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 ZSWIM7Q19AV6 140 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 LIN52Q52LA3 116 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 IFI44LQ53G44 452 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 AP1ARQ63HQ0 302 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 OLIG3Q7RTU3 272 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 GGNQ86UU5 652 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 SMYD1Q8NB12 490 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 PAPD5Q8NDF8 572 aaKnown RBP9.25□□□□□ -0.93
NEDD8-202ENST00000396828 OR52P1PQ8NH57 321 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 RNF122Q9H9V4 155 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 UBTD1Q9HAC8 227 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 RNPEPL1Q9HAU8 725 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 DSCAMO60469 2012 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 FBN3Q75N90 2809 aa9.25□□□□□ -0.93
NEDD8-202ENST00000396828 H3BNX3 289 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 H7C1Q1 480 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 SMAD7O15105 426 aaKnown RBP9.24□□□□□ -0.93
NEDD8-202ENST00000396828 UGT2B17O75795 530 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 OPN1LWP04000 364 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 FABP3P05413 133 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 CRHP06850 196 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 HEXAP06865 529 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 FESP07332 822 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 ANPEPP15144 967 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 ITGA2P17301 1181 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 CD247P20963 164 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 CRYGSP22914 178 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 FASP25445 335 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 CLK3P49761 638 aaKnown RBP9.24□□□□□ -0.93
NEDD8-202ENST00000396828 CRYBA2P53672 197 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 ATP12AP54707 1039 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 PON3Q15166 354 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF141Q15928 474 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 SNCBQ16143 134 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 DUSP7Q16829 419 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 TMEM44Q2T9K0 475 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 GRAMD1BQ3KR37 738 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 SHEQ5VZ18 495 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 OR2A2Q6IF42 318 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 DHRS4L2Q6PKH6 230 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 VTCN1Q7Z7D3 282 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 PRIMA1Q86XR5 153 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 FAM86B1Q8N7N1 296 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF614Q8N883 585 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 GEMIN6Q8WXD5 167 aaKnown RBP9.24□□□□□ -0.93
NEDD8-202ENST00000396828 SLCO4A1Q96BD0 722 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 C1GALT1C1Q96EU7 318 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 PERPQ96FX8 193 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 COX4I2Q96KJ9 171 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 Q96MF0 132 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 MED18Q9BUE0 208 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 CHID1Q9BWS9 393 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 QRSL1Q9H0R6 528 aaKnown RBP9.24□□□□□ -0.93
NEDD8-202ENST00000396828 EVA1AQ9H8M9 152 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 IL1RAPQ9NPH3 570 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 UBQLN4Q9NRR5 601 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-202ENST00000396828 FBXO34Q9NWN3 711 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 STX18Q9P2W9 335 aaKnown RBP9.24□□□□□ -0.93
NEDD8-202ENST00000396828 CLEC4AQ9UMR7 237 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF443Q9Y2A4 671 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-202ENST00000396828 SLC9A8Q9Y2E8 581 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 SH3GLB1Q9Y371 365 aa9.24□□□□□ -0.93
NEDD8-202ENST00000396828 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 KIAA1324LA8MWY0 1029 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-202ENST00000396828 H3BNH8 94 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 SCDO00767 359 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 GNGT2O14610 69 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 TPST1O60507 370 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 SMPD2O60906 423 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 TIPRLO75663 272 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 UTS2O95399 124 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 ANGPTL1O95841 491 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 PLAUP00749 431 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 SEMG1P04279 462 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 IFNW1P05000 195 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 CD8BP10966 210 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 NID1P14543 1247 aa9.23□□□□□ -0.93
NEDD8-202ENST00000396828 POU2F1P14859 743 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms