RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 GYPBP06028 91 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 RRAS2P62070 204 aaPredicted RBP9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 HENMT1Q5T8I9 393 aaKnown RBP9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 KIAA0895LQ68EN5 471 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 HBMQ6B0K9 141 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 LCN10Q6JVE6 187 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 SULF2Q8IWU5 870 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 CPT1CQ8TCG5 803 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 KHSRPQ92945 711 aaKnown RBP eCLIP9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 APOOQ9BUR5 198 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 SUCNR1Q9BXA5 334 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC2A9Q9NRM0 540 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 KCMF1Q9P0J7 381 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC6A14Q9UN76 642 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 SIGLEC1Q9BZZ2 1709 aa9.58□□□□□ -0.88
LIMCH1-203ENST00000396595 TSPAN11A1L157 253 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 MEIS3P1A6NDR6 274 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 H0YIV9 168 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC16A6O15403 523 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 FZD7O75084 574 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 JUNBP17275 347 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 RANP62826 216 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR1Q1Q15612 314 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 STEAP3Q658P3 488 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR4M1Q8NGD0 313 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 LINC01599Q8WXQ3 324 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR52A5Q9H2C5 316 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 TRAV27A0A087WT01 109 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR52A4PA6NMU1 304 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 DPM1O60762 260 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 PSMB1P20618 241 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 POLR2IP36954 125 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 HTR3AP46098 478 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 RBMS2Q15434 407 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 HTR3DQ70Z44 454 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 AMIGO3Q86WK7 504 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 VRK2Q86Y07 508 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 BPIFB2Q8N4F0 458 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 PXT1Q8NFP0 134 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 STEAP2Q8NFT2 490 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR52E1Q8NGJ3 308 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 UBTD2Q8WUN7 234 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 SGCZQ96LD1 299 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR10A5Q9H207 317 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR10A2Q9H208 303 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 FOXK1P85037 733 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 EEF1A2Q05639 463 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 GPR18Q14330 331 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 PCK2Q16822 640 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 WBP2NLQ6ICG8 309 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 ALKAL2Q6UX46 152 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC30A7Q8NEW0 376 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR10K1Q8NGX5 313 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 ZFAND1Q8TCF1 268 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR1E3Q8WZA6 343 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 EGLN3Q9H6Z9 239 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 METTL17Q9H7H0 456 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 MYO18AQ92614 2054 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 F5H5K5 113 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 J3KTA2 159 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC43A1O75387 559 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 PTHP01270 115 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 HLA-AP01891 365 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 EDN1P05305 212 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 HLA-DMAP28067 261 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 RGRP47804 291 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 ADARB1P78563 741 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 DSC1Q08554 894 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 ILKQ13418 452 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 PDZD11Q5EBL8 140 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 TRNP1Q6NT89 227 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 Q6ZPB1 254 aaPredicted RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR9A4Q8NGU2 314 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 PPP1R35Q8TAP8 253 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 DHRS9Q9BPW9 319 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 RTP3Q9BQQ7 232 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 SLC25A31Q9H0C2 315 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 NIPAL2Q9H841 368 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 RAB9BQ9NP90 201 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 LRP6O75581 1613 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 TRBV4-1A0A0J9YWV2 114 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 METTL15A6NJ78 407 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 CD300LBA8K4G0 201 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 GPR137BO60478 399 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 ACTL6BO94805 426 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 TIMP2P16035 220 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OPRD1P41143 372 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 EEF1A1P68104 462 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 ACY1Q03154 408 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 CNN3Q15417 329 aaKnown RBP9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 LEXMQ3ZCV2 418 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 PHYHD1Q5SRE7 291 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 TMEM184AQ6ZMB5 413 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 FCRLAQ7L513 359 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR52R1Q8NGF1 315 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OR6F1Q8NGZ6 308 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 OPA3Q9H6K4 179 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 IL23AQ9NPF7 189 aa9.57□□□□□ -0.88
LIMCH1-203ENST00000396595 UGT2A1Q9Y4X1 527 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms