RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 FBXL4Q9UKA2 621 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ADAM18Q9Y3Q7 739 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ALG1L2C9J202 215 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 GABRPO00591 440 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 RNF13O43567 381 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 HCRTR2O43614 444 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 NDUFB5O43674 189 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 IDH3BO43837 385 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 EIF4E2O60573 245 aaKnown RBP13.65□□□□□ -0.22
CBX3-202ENST00000396386 CLEC2LP0C7M8 214 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 GAAP10253 952 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 GALP22466 123 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 TGM1P22735 817 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ABCD3P28288 659 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 SDC2P34741 201 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 CAPZA2P47755 286 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 TAS2R43P59537 309 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 GXYLT1Q4G148 440 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 PEAR1Q5VY43 1037 aaPredicted RBP13.65□□□□□ -0.22
CBX3-202ENST00000396386 VASNQ6EMK4 673 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 MARCH9Q86YJ5 346 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 EID2Q8N6I1 236 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 POMGNT2Q8NAT1 580 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 AP3S1Q92572 193 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 WDFY2Q96P53 400 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 NDEL1Q9GZM8 345 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 NRIP3Q9NQ35 241 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 BABAM2Q9NXR7 383 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 POLHQ9Y253 713 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 HIF3AQ9Y2N7 669 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 SLC6A5Q9Y345 797 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 UGT2A1Q9Y4X1 527 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 PCDHGB6Q9Y5F9 930 aa13.65□□□□□ -0.22
CBX3-202ENST00000396386 ANKRD33BA6NCL7 494 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 RGS9O75916 674 aaPredicted RBP13.64□□□□□ -0.23
CBX3-202ENST00000396386 TIAF1O95411 115 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 HEXBP07686 556 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 TACR3P29371 465 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 TNFSF8P32971 234 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 ZNF85Q03923 595 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 DBPQ10586 325 aaPredicted RBP13.64□□□□□ -0.23
CBX3-202ENST00000396386 GGTLC2Q14390 218 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 ANKRD37Q7Z713 158 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 MARCH3Q86UD3 253 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 CNN2Q99439 309 aaKnown RBP13.64□□□□□ -0.23
CBX3-202ENST00000396386 TIMP4Q99727 224 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 CCDC32Q9BV29 185 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 KATNB1Q9BVA0 655 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 MMP25Q9NPA2 562 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 NANSQ9NR45 359 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 KLHL1Q9NR64 748 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 MPDZO75970 2070 aa13.64□□□□□ -0.23
CBX3-202ENST00000396386 FUOMA2VDF0 154 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 IDSB3KWA1 339 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 TNFRSF10AO00220 468 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 AGRPO00253 132 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 CASKO14936 926 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 CDC40O60508 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
CBX3-202ENST00000396386 PGCP20142 388 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 GTF2E2P29084 291 aaKnown RBP13.63□□□□□ -0.23
CBX3-202ENST00000396386 TGM4P49221 684 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 BCAP31P51572 246 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 ERVK-25P63136 954 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 SLC35D3Q5M8T2 416 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 STEAP3Q658P3 488 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 PWWP2BQ6NUJ5 590 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 NUP54Q7Z3B4 507 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 ZNF554Q86TJ5 538 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 SLC22A16Q86VW1 577 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 LAX1Q8IWV1 398 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 FAM83FQ8NEG4 500 aaPredicted RBP13.63□□□□□ -0.23
CBX3-202ENST00000396386 MOSPD2Q8NHP6 518 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 ASB15Q8WXK1 588 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 RASD2Q96D21 266 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 RTN4RQ9BZR6 473 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 IGHV3-20A0A0C4DH32 117 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 CD8B2A6NJW9 211 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 ALOX12BO75342 701 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 SNX4O95219 450 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 CD8BP10966 210 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 CD53P19397 219 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 ITPKBP27987 946 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 EVI2BP34910 448 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 AQP2P41181 271 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 NRG3P56975 720 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 RNF4P78317 190 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 DCDP81605 110 aaKnown RBP13.63□□□□□ -0.23
CBX3-202ENST00000396386 EGR4Q05215 589 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 DNASE1L3Q13609 305 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 NANOGNBQ7Z5D8 188 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 SLC38A9Q8NBW4 561 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 NPEPL1Q8NDH3 523 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 OR5W2Q8NH69 310 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 NEIL3Q8TAT5 605 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 IFI44Q8TCB0 444 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 SNRNP27Q8WVK2 155 aaKnown RBP13.63□□□□□ -0.23
CBX3-202ENST00000396386 TP53INP1Q96A56 240 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 ZMYND19Q96E35 227 aaPredicted RBP13.63□□□□□ -0.23
CBX3-202ENST00000396386 C4orf36Q96KX1 117 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms