RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CPSF4O95639 269 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 IMPDH2P12268 514 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 UQCRBP14927 111 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 LBPP18428 481 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 MPGP29372 298 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 APOBEC3AP31941 199 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 THBS2P35442 1172 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 EFNA4P52798 201 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 VSNL1P62760 191 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 SPOCK1Q08629 439 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 CHI3L2Q15782 390 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 CASP12Q6UXS9 341 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 ZNF440Q8IYI8 595 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 OR52E4Q8NGH9 312 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 AENQ8WTP8 325 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 CNOT9Q92600 299 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 C20orf27Q9GZN8 174 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 ADAM19Q9H013 955 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 OBP2BQ9NPH6 170 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 SLC7A10Q9NS82 523 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 UPB1Q9UBR1 384 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 LPAR3Q9UBY5 353 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 PTNP21246 168 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 TACR3P29371 465 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 S100A3P33764 101 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 FOXG1P55316 489 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 PRPS1P60891 318 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 FAM174BQ3ZCQ3 159 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 POMGNT2Q8NAT1 580 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 C10orf105Q8TEF2 133 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 FAM168AQ92567 244 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 SORT1Q99523 831 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 MEAF6Q9HAF1 191 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 PMF1-BGLAPU3KQ54 211 aa15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 YLPM1P49750 1951 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-202ENST00000394082 TMEM72A0PK05 275 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 CFAP73A6NFT4 308 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 CCDC154A6NI56 674 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 AP3D1O14617 1153 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 WNT11O96014 354 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 F12P00748 615 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 GPIP06744 558 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 DBIP07108 87 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 CHRM4P08173 479 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 IL7RP16871 459 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 SLC1A6P48664 564 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 EPS8Q12929 822 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 SYPL1Q16563 259 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 ZSWIM7Q19AV6 140 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 TSPO2Q5TGU0 170 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 WDR93Q6P2C0 686 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 ABHD12BQ7Z5M8 362 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 RNF130Q86XS8 419 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 PHC2Q8IXK0 858 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 MREGQ8N565 214 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 ZNF525Q8N782 197 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 ANKFN1Q8N957 763 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 WDR60Q8WVS4 1066 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 PKNOX2Q96KN3 472 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 PPP1R36Q96LQ0 422 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 ZNF317Q96PQ6 595 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 PANX1Q96RD7 426 aa15.31■□□□□ 0.04
SNRPA1-202ENST00000394082 A0A1W2PR80 420 aa15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 NDUFS8O00217 210 aa15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 ZNF500O60304 480 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 VAMP5O95183 116 aa15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 PGRP06401 933 aa15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 SWI5Q1ZZU3 235 aa15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 C3orf36Q3SXR2 165 aa15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 MRPL2Q5T653 305 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 ZIC4Q8N9L1 334 aa15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 NUF2Q9BZD4 464 aa15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 HEATR1Q9H583 2144 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 MOV10Q9HCE1 1003 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-202ENST00000394082 DSPPQ9NZW4 1301 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 WDR91A4D1P6 747 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 CDHR4A6H8M9 788 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 OR6C65A6NJZ3 312 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 LIPT2A6NK58 231 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 AQP7P3A6NL99 342 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 CCNA2P20248 432 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 USF1P22415 310 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 SLC25A3Q00325 362 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 OTUD3Q5T2D3 398 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 CYB5R2Q6BCY4 276 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 KLHL24Q6TFL4 600 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 SPATA19Q7Z5L4 167 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 PEX5LQ8IYB4 626 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 GLB1L3Q8NCI6 653 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 OR9K2Q8NGE7 335 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 TEX37Q96LM6 180 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 KCNK17Q96T54 332 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 AIG1Q9NVV5 245 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 ATP23Q9Y6H3 246 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 SVEP1Q4LDE5 3571 aa15.29■□□□□ 0.04
SNRPA1-202ENST00000394082 A0A096LPI6 279 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 ZC3H12DA2A288 527 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 VWC2LB2RUY7 222 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 RGS16O15492 202 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 KRT75O95678 551 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms