RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 LRATO95237 230 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC25A14O95258 325 aaPredicted RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 LGI1O95970 557 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 HMOX1P09601 288 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ZDHHC11BP0C7U3 371 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 RBMY1CP0DJD4 496 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CELP19835 753 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 HLA-DPA1P20036 260 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 MUTP22033 750 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CXCR2P25025 360 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ADSSP30520 456 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CALCRP30988 508 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 FGF9P31371 208 aaPredicted RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 LEPP41159 167 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 GPM6AP51674 278 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 AP3M2P53677 418 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 BIDP55957 195 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC26A5P58743 744 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 KRTAP12-3P60328 96 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 KRTAP12-4P60329 112 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 HMGCS1Q01581 520 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ASPHQ12797 758 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SNTB2Q13425 540 aaKnown RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CUL1Q13616 776 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 PIGHQ14442 188 aaPredicted RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CYTH1Q15438 398 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CHI3L2Q15782 390 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 MAPK6Q16659 721 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 NSUN5P1Q3KNT7 163 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 KRTAP21-2Q3LI59 83 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 PARP15Q460N3 678 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ZBED5Q49AG3 693 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 C12orf60Q5U649 245 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 LRRC8BQ6P9F7 803 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CBLN3Q6UW01 205 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 HSDL2Q6YN16 418 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 Q6ZR03 302 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ANKRD23Q86SG2 305 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 LRRC43Q8N309 656 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ATP6V0D2Q8N8Y2 350 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 LINC00304Q8N9R0 145 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SPC24Q8NBT2 197 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 FAM71CQ8NEG0 241 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 OR4F15Q8NGB8 312 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 OR5AU1Q8NGC0 362 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 OR10A7Q8NGE5 316 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 OR56B4Q8NH76 319 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 URGCPQ8TCY9 931 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CD300LFQ8TDQ1 290 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 DQX1Q8TE96 717 aaKnown RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 PAQR8Q8TEZ7 354 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ZFP90Q8TF47 636 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 PTP4A1Q93096 173 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 PDXPQ96GD0 296 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 VPS35Q96QK1 796 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SULT4A1Q9BR01 284 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC35A5Q9BS91 424 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 DHX33Q9H6R0 707 aaKnown RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 NOX3Q9HBY0 568 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SAMSN1Q9NSI8 373 aaKnown RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF586Q9NXT0 402 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 KCNIP1Q9NZI2 227 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNRD1Q9P1U0 126 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 TBK1Q9UHD2 729 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 IL20RAQ9UHF4 553 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ANAPC7Q9UJX3 599 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF222Q9UK12 451 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 DNPEPQ9ULA0 475 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 FANCIQ9NVI1 1328 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 FBN1P35555 2871 aaKnown RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 IGHV3-66A0A0C4DH42 116 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 A0A1W2PNV4 684 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 RNF222A6NCQ9 220 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC9B1P1A6NJY1 282 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF233A6NK53 670 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 INS-IGF2F8WCM5 200 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CLDN5O00501 218 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 TPST2O60704 377 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 BCAS1O75363 584 aaPredicted RBP0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 MT-ATP6P00846 226 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 LGALS2P05162 132 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CA3P07451 260 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 ADRA2AP08913 450 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 H2BFMP0C1H6 154 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 TNNI3P19429 210 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CYP2B6P20813 491 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 OMGP23515 440 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 PRDX6P30041 224 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 SFNP31947 248 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 TNFSF9P41273 254 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 BDKRB1P46663 353 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CX3CR1P49238 355 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 DAP3P51398 398 aaKnown RBP0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CRISP3P54108 245 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 PKNOX1P55347 436 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 RAP1AP62834 184 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 PITPNAQ00169 270 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 FLI1Q01543 452 aaPredicted RBP0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 GABPB1Q06547 395 aaPredicted RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms