RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SPIN1Q9Y657 262 aaPredicted RBP18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 LOC102723996A0A087X1L8 192 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 C2orf72A6NCS6 295 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 CCDC182A6NF36 153 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 SLC22A31A6NKX4 558 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 B4E171 279 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 C9J4A7 227 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 CDC40O60508 579 aaKnown RBP eCLIP18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 UMODP07911 640 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 CD59P13987 128 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 SLC2A5P22732 501 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 PSMA1P25786 263 aaKnown RBP18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 TSPAN7P41732 249 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 QPRTQ15274 297 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 SF3A2Q15428 464 aaKnown RBP18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 OR5M10Q6IEU7 315 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 FAM98AQ8NCA5 519 aaKnown RBP18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 SDR9C7Q8NEX9 313 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 HGDQ93099 445 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 TAAR8Q969N4 342 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 JAM3Q9BX67 310 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 PLGRKTQ9HBL7 147 aa18.06■□□□□ 0.48
PDLIM5-205ENST00000380180 GYPBP06028 91 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 ASAH2BP0C7U1 165 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 NAGAP17050 411 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 AQP2P41181 271 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 CRYBB2P43320 205 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 PCOLCEQ15113 449 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 COL28A1Q2UY09 1125 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 ARMC4Q5T2S8 1044 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 OR9Q1Q8NGQ5 310 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 KLHL1Q9NR64 748 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 AKAP7Q9P0M2 348 aaPredicted RBP18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 HIF3AQ9Y2N7 669 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 OR2J2O76002 312 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 TSPAN19P0C672 248 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 RPS5P46782 204 aaKnown RBP18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 ERVK-25P63136 954 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 TMED1Q13445 227 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 BTBD16Q32M84 506 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 MISPQ8IVT2 679 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 KLHL36Q8N4N3 616 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 KBTBD8Q8NFY9 601 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 KATNB1Q9BVA0 655 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 EXOSC4Q9NPD3 245 aaKnown RBP18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 ISYNA1Q9NPH2 558 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 SEC14L4Q9UDX3 406 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 KLHL21Q9UJP4 597 aa18.05■□□□□ 0.48
PDLIM5-205ENST00000380180 C12orf71A8MTZ7 269 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 ARPC3O15145 178 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 OPRL1P41146 370 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 C17orf67Q0P5P2 114 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 ZNF829Q3KNS6 432 aaPredicted RBP18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 DCAF12Q5T6F0 453 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 NUP54Q7Z3B4 507 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 ACBD7Q8N6N7 88 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 ELP5Q8TE02 316 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 GPX7Q96SL4 187 aaPredicted RBP18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 DEFB126Q9BYW3 111 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 GALNT9Q9HCQ5 603 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 TAS2R10Q9NYW0 307 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 STUB1Q9UNE7 303 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 LOXL2Q9Y4K0 774 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 ALPK2Q86TB3 2170 aa18.04■□□□□ 0.48
PDLIM5-205ENST00000380180 PNMA8CA0A1B0GUJ8 204 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 POLR2HP52434 150 aaKnown RBP18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 TPBGQ13641 420 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 ZNF791Q3KP31 576 aaPredicted RBP18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 C1QL3Q5VWW1 255 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 LYPD8Q6UX82 237 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 ADGRG3Q86Y34 549 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 SLC15A4Q8N697 577 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 TMEM99Q8N816 258 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 TTC9Q92623 222 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 DNAJA3Q96EY1 480 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 IGHV1-45A0A0A0MS14 117 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 B4DXG7 233 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 LALBAP00709 142 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 BICRALQ6AI39 1079 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 GDPGP1Q6ZNW5 385 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 NAXDQ8IW45 347 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 LRRC75AQ8NAA5 344 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 NPEPL1Q8NDH3 523 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 OR2Y1Q8NGV0 311 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 OR52N1Q8NH53 320 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 SPRYD4Q8WW59 207 aaPredicted RBP18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 TRMT61AQ96FX7 289 aaKnown RBP18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 NMNAT3Q96T66 252 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 TBX5Q99593 518 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 HAO2Q9NYQ3 351 aa18.03■□□□□ 0.48
PDLIM5-205ENST00000380180 TMED7-TICAM2A0A0A6YYA0 188 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 IDH3BO43837 385 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 SLC25A12O75746 678 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 MRPL3P09001 348 aaKnown RBP18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 UQCRC1P31930 480 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 CLDN6P56747 220 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 ISXQ2M1V0 245 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 ALG10Q5BKT4 473 aa18.02■□□□□ 0.48
PDLIM5-205ENST00000380180 LINC00299Q6ZSB3 139 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms