RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PQBP1O60828 265 aaKnown RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 AGR2O95994 175 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 GASTP01350 101 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 LRG1P02750 347 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 UCHL1P09936 223 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 AQP1P29972 269 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 GLP1RP43220 463 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ART1P52961 327 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 GAS1P54826 345 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 CD81P60033 236 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ELAVL1Q15717 326 aaKnown RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ARMC6Q6NXE6 501 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 LILRA6Q6PI73 481 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 PRICKLE2Q7Z3G6 844 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 CTU1Q7Z7A3 348 aaKnown RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TCEANCQ8N8B7 351 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TTC16Q8NEE8 873 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 HUS1BQ8NHY5 278 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 STOML3Q8TAV4 291 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 HAVCR2Q8TDQ0 301 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SMAP2Q8WU79 429 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ARL11Q969Q4 196 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TM6SF2Q9BZW4 377 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM185BQ9H7F4 350 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 SEC61A2Q9H9S3 476 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 CERS4Q9HA82 394 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 HRASLSQ9HDD0 168 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 ZSCAN32Q9NX65 697 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 NDOR1Q9UHB4 597 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 RASD1Q9Y272 281 aa6.92□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM129A0AVI4 362 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 OR51F1A6NGY5 319 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 SNRPGP15A8MWD9 76 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 B4E171 279 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ANKRD66B4E2M5 251 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 UBL3O95164 117 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 NSA2O95478 260 aaKnown RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 HLA-DPB1P04440 258 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 NDUFS1P28331 727 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 GALNSP34059 522 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 OR1E2P47887 323 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 GPR15P49685 360 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 GATMP50440 423 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 POLR2LP62875 67 aaKnown RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ARMC12Q5T9G4 340 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 FAM46CQ5VWP2 391 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 RSPO2Q6UXX9 243 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF574Q6ZN55 896 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 PRSS45Q7RTY3 260 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ANGPTL5Q86XS5 388 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 C19orf47Q8N9M1 422 aaKnown RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 SLC25A36Q96CQ1 311 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 SPACA7Q96KW9 195 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 DOHHQ9BU89 302 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 DDA1Q9BW61 102 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 TDP1Q9NUW8 608 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 NUDT4Q9NZJ9 180 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CHRNA9Q9UGM1 479 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 RCE1Q9Y256 329 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 MTCL1Q9Y4B5 1905 aaKnown RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 TRAV14DV4A0A0A6YYC5 116 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 LRRN3E7EW58 273 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 FAM227AF5H4B4 570 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 NDUFS3O75489 264 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 SOX14O95416 240 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF7P17097 686 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 MAGEB1P43366 347 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 UBE2MP61081 183 aaKnown RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 WDR5P61964 334 aaKnown RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CSRP2Q16527 193 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF630Q2M218 657 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF805Q5CZA5 627 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CXorf57Q6NSI4 855 aaKnown RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 KIAA1161Q6NSJ0 714 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 LANCL3Q6ZV70 420 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 GLT6D1Q7Z4J2 308 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 PARGQ86W56 976 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF485Q8NCK3 441 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 C22orf15Q8WYQ4 148 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 PHYHIPQ92561 330 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 TIFAQ96CG3 184 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 GPR21Q99679 349 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF471Q9BX82 626 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 LRRN3Q9H3W5 708 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 RDH14Q9HBH5 336 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 GPN1Q9HCN4 374 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-201ENST00000379989 RPS10P5Q9NQ39 176 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CKAP5Q14008 2032 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CCDC187A0A096LP49 1063 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 TRBV5-4A0A0C4DH59 114 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 E7EQ34 232 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CLIC1O00299 241 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 GOSR2O14653 212 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 ITGB1BP1O14713 200 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 HSPA12AO43301 675 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CIDEAO60543 219 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 OR12D1P0DN82 309 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 CD79AP11912 226 aa6.91□□□□□ -1.3
CDKL5-201ENST00000379989 LIMS1P48059 325 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms