RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 HPCAP84074 193 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 LGALS3BPQ08380 585 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 CCNIQ14094 377 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 GPAT3Q53EU6 434 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 XKR7Q5GH72 579 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 C6orf136Q5SQH8 315 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 OTUD3Q5T2D3 398 aaPredicted RBP15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 GPAT4Q86UL3 456 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 ANKRD46Q86W74 232 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 IFT20Q8IY31 132 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 ZNF540Q8NDQ6 660 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 FAM71CQ8NEG0 241 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 EPS8L3Q8TE67 593 aaKnown RBP15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 TUBGCP3Q96CW5 907 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 DDIT4LQ96D03 193 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 AURKBQ96GD4 344 aaPredicted RBP15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 ZNF385AQ96PM9 386 aaKnown RBP15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 ADAM19Q9H013 955 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 SH3PXD2BA1X283 911 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 ZC3H12DA2A288 527 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 B9A039 149 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 NR5A2O00482 541 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 EIF1BO60739 113 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 RGS9O75916 674 aaPredicted RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 SNUPNO95149 360 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 AKR7A3O95154 331 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 STAMBPO95630 424 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 CPSF4O95639 269 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 CRYAAP02489 173 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 G6PDP11413 515 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 UBE2NP61088 152 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 SLC17A1Q14916 467 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 TBRG1Q3YBR2 411 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 MEX3DQ86XN8 651 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 ZCCHC24Q8N2G6 241 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 UBLCP1Q8WVY7 318 aaPredicted RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 CNOT9Q92600 299 aaKnown RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 ROPN1LQ96C74 230 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 ZG16BQ96DA0 208 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 ALKBH3Q96Q83 286 aaPredicted RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 RHOXF2Q9BQY4 288 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 RAB1BQ9H0U4 201 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 SEC61A2Q9H9S3 476 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 OSGIN1Q9UJX0 560 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 PCDHGB4Q9UN71 923 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 TRAPPC4Q9Y296 219 aa15.47■□□□□ 0.07
PDLIM4-202ENST00000379018 A0A096LPE4 126 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 A0A1W2PPZ6 126 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 SPRY1O43609 319 aaPredicted RBP15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 SCN2BO60939 215 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 FGF4P08620 206 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 DAOP14920 347 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 TACR3P29371 465 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 SLC1A3P43003 542 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 CLK1P49759 484 aaKnown RBP15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 POLR2HP52434 150 aaKnown RBP15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 CHN2P52757 468 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 KCNJ10P78508 379 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 H3F3AP84243 136 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 FUT5Q11128 374 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 OR7A5Q15622 319 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 ADIPOQQ15848 244 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 FRRS1Q6ZNA5 592 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 RIMKLAQ8IXN7 391 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 TMEM99Q8N816 258 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 LINC01356Q8N9X3 169 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 OR9K2Q8NGE7 335 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 PPP1R36Q96LQ0 422 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 TXLNGYQ9BZA5 131 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 TMEM45AQ9NWC5 275 aa15.46■□□□□ 0.07
PDLIM4-202ENST00000379018 hCG_2039718K7EN88 272 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 DYNC1I1O14576 645 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 NPHS1O60500 1241 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 HTR3AP46098 478 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 IDH3GP51553 393 aaPredicted RBP15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 NAAAQ02083 359 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 PLAURQ03405 335 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 CEACAM7Q14002 265 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 TRIP10Q15642 601 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 PAQR6Q6TCH4 344 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 ABHD12BQ7Z5M8 362 aaPredicted RBP15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 SVOPLQ8N434 492 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 POMGNT2Q8NAT1 580 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 OR1K1Q8NGR3 316 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 TMEM45BQ96B21 275 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 KATNB1Q9BVA0 655 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 PLK3Q9H4B4 646 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 DYNLRB1Q9NP97 96 aa15.45■□□□□ 0.06
PDLIM4-202ENST00000379018 ZNF587BE7ETH6 402 aa15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 LILRA1O75019 489 aa15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 ERCC1P07992 297 aaPredicted RBP15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 CECR9P0C854 216 aa15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 FKBP2P26885 142 aaKnown RBP15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 CALCRP30988 508 aa15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 CHI3L1P36222 383 aaPredicted RBP15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 KHKP50053 298 aa15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 PPOXP50336 477 aa15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 ACTG1P63261 375 aa15.44■□□□□ 0.06
PDLIM4-202ENST00000379018 SPATA21Q7Z572 469 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms