RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 SLC13A4Q9UKG4 626 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 SH3GLB1Q9Y371 365 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 CHST2Q9Y4C5 530 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 ENPP4Q9Y6X5 453 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 MT-ND1P03886 318 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 PEPDP12955 493 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 FOSL1P15407 271 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 NKX6-1P78426 367 aaPredicted RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 GK3PQ14409 553 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 TRIP10Q15642 601 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 OGFRL1Q5TC84 451 aaPredicted RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 OR2T5Q6IEZ7 315 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 TSEN54Q7Z6J9 526 aaKnown RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 AMIGO2Q86SJ2 522 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 CARM1Q86X55 608 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 P3H2Q8IVL5 708 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 OR5M1Q8NGP8 315 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 OR2T29Q8NH02 315 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 PIK3IP1Q96FE7 263 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 AMBRA1Q9C0C7 1298 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 VCX3BQ9H321 246 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 PTGES2Q9H7Z7 377 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 UBTD1Q9HAC8 227 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 SDHAF3Q9NRP4 125 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 UBQLN4Q9NRR5 601 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 BEX4Q9NWD9 120 aaPredicted RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 MED11Q9P086 117 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 ABCG2Q9UNQ0 655 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 TESMINQ9Y4I5 508 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 NPIPA5A0A0B4J1W7 369 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 CENPVL1A0A0U1RR11 272 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 A8MXE2 369 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 NPIPA7E9PJI5 369 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 hCG_2039718K7EN88 272 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 MSTNO14793 375 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 NPIPA8P0DM63 369 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 HOXB4P17483 251 aaPredicted RBP12.33□□□□□ -0.44
PRPF18-202ENST00000378572 RHCEP18577 417 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 TBXA2RP21731 343 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 OR1E2P47887 323 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 FGFBP1Q14512 234 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 VWA1Q6PCB0 445 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 ADGRE4PQ86SQ3 457 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 BIVMQ86UB2 503 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 COMTD1Q86VU5 262 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF527Q8NB42 609 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 NRG4Q8WWG1 115 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 ZC3HAV1LQ96H79 300 aaKnown RBP12.33□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF845Q96IR2 970 aaPredicted RBP12.33□□□□□ -0.44
PRPF18-202ENST00000378572 UCN2Q96RP3 112 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 OPN3Q9H1Y3 402 aaPredicted RBP12.33□□□□□ -0.44
PRPF18-202ENST00000378572 NTN4Q9HB63 628 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 C8orf4Q9NR00 106 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 DLL4Q9NR61 685 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF226Q9NYT6 803 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 DTNAQ9Y4J8 743 aa12.33□□□□□ -0.44
PRPF18-202ENST00000378572 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 CDHR4A6H8M9 788 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 ADAMDEC1O15204 470 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 ARHGEF9O43307 516 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 SMPD2O60906 423 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 TNFSF13O75888 250 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 POU2F1P14859 743 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 CD53P19397 219 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 TNFRSF1BP20333 461 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 VHLP40337 213 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 FAM27E3Q08E93 113 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 KLHL26Q53HC5 615 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 PDZK1Q5T2W1 519 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 MRPL2Q5T653 305 aaKnown RBP12.32□□□□□ -0.44
PRPF18-202ENST00000378572 CLIP4Q8N3C7 705 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 OR2M3Q8NG83 312 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 C18orf12Q96KH6 178 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 SMR3AQ99954 134 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 TBL1XR1Q9BZK7 514 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 SEMA6AQ9H2E6 1030 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 FLRT3Q9NZU0 649 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 SLC35A3Q9Y2D2 325 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 FAM32AQ9Y421 112 aaKnown RBP12.32□□□□□ -0.44
PRPF18-202ENST00000378572 MED12LQ86YW9 2145 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
PRPF18-202ENST00000378572 NAV3Q8IVL0 2385 aa12.32□□□□□ -0.44
PRPF18-202ENST00000378572 A0A1W2PQD3 144 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 SERINC4A6NH21 518 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 GNGT2O14610 69 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 HCRTR2O43614 444 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 ZIC3O60481 467 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 UTS2O95399 124 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 OXSR1O95747 527 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 CRHP06850 196 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 PEX2P28328 305 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 CD79BP40259 229 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 GAS1P54826 345 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 RPS3AP61247 264 aaKnown RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 LTBQ06643 244 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 GANABQ14697 944 aaKnown RBP12.31□□□□□ -0.44
PRPF18-202ENST00000378572 BCL2A1Q16548 175 aa12.31□□□□□ -0.44
PRPF18-202ENST00000378572 SGCBQ16585 318 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms