RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CRYBB2P43320 205 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 HTR5AP47898 357 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 GBX1Q14549 363 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ARL6IP1Q15041 203 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 CRB2Q5IJ48 1285 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 NKAIN2Q5VXU1 208 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 LINGO4Q6UY18 593 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 RNF165Q6ZSG1 346 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 UMODL1-AS1Q8N2C9 162 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 KDM8Q8N371 416 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 OR13C3Q8NGS6 347 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 URM1Q9BTM9 101 aaKnown RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 POTEKPQ9BYX7 375 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ZCCHC4Q9H5U6 513 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 MMP24Q9Y5R2 645 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 A0A0A6YYH2 397 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 A0A0B4J2A0 478 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 A6NJ64 397 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 DCTN6O00399 190 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 PRICKLE3O43900 615 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 MMP2P08253 660 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 F2RL1P55085 397 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 PPIAP62937 165 aaKnown RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 CHIT1Q13231 466 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 SLC14A2Q15849 920 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 PRAMEF14Q5SWL7 426 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 OR2G6Q5TZ20 316 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 LAIR2Q6ISS4 152 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TMIGD1Q6UXZ0 262 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 UBE3DQ7Z6J8 389 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TMEM130Q8N3G9 435 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 OR9Q2Q8NGE9 314 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 WNT2BQ93097 391 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TMEM18Q96B42 140 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 SUSD3Q96L08 255 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 INTS14Q96SY0 518 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TXN2Q99757 166 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 DNAJC4Q9NNZ3 241 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 SHPKQ9UHJ6 478 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 SH2B3Q9UQQ2 575 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 MEMO1Q9Y316 297 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 MAP4K5Q9Y4K4 846 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 IFNA21P01568 189 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 IFNA6P05013 189 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 PIPP12273 146 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 HOXA6P31267 233 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 NSG1P42857 185 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 FOXA1P55317 472 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 RANP62826 216 aaKnown RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 FAM199XQ6PEV8 388 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 MBOAT1Q6ZNC8 495 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 ISCA2Q86U28 154 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 RASGEF1AQ8N9B8 481 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 HMGCLL1Q8TB92 370 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 PROKR1Q8TCW9 393 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TIFAQ96CG3 184 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 WDR89Q96FK6 387 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 INPP5KQ9BT40 448 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TMEM208Q9BTX3 173 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 SGK2Q9HBY8 427 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 THSD1Q9NS62 852 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TDP1Q9NUW8 608 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TAS2R8Q9NYW2 309 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 SUSD2Q9UGT4 822 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 A0A0G2JN53 185 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 ANKRD61A6NGH8 418 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TBX18O95935 607 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 ANXA4P09525 319 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 HOXA11P31270 313 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 ACVRL1P37023 503 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 C8orf82Q6P1X6 216 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 HSD17B11Q8NBQ5 300 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 STEAP2Q8NFT2 490 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 OR10H4Q8NGA5 316 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 PARD6GQ9BYG4 376 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 PPP1R3EQ9H7J1 279 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 TAS2R5Q9NYW4 299 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 SPG21Q9NZD8 308 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 USP36Q9P275 1121 aaKnown RBP10.97□□□□□ -0.65
NPHP4-202ENST00000378161 ATG4BQ9Y4P1 393 aa10.97□□□□□ -0.65
NPHP4-202ENST00000378161 C2orf78A6NCI8 922 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 GPR89AB7ZAQ6 455 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 UMAD1C9J7I0 102 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 GPR89BP0CG08 455 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 S100GP29377 79 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 OR1E2P47887 323 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 DGKGP49619 791 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 DGCR2P98153 550 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 RAB11BQ15907 218 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 PKDCCQ504Y2 493 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 GDPD4Q6W3E5 623 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 NDUFAF7Q7L592 441 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 OAFQ86UD1 273 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF280BQ86YH2 543 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 PLA2G15Q8NCC3 412 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 CCDC54Q8NEL0 328 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 BRI3BPQ8WY22 251 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF607Q96SK3 696 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 CNTNAP3Q9BZ76 1288 aa10.96□□□□□ -0.65
NPHP4-202ENST00000378161 ATG10Q9H0Y0 220 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms