RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 OPN5Q6U736 354 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 BEND4Q6ZU67 534 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 SULT4A1Q9BR01 284 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 THAP7Q9BT49 309 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-201ENST00000378156 NPAP1Q9NZP6 1156 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 NDRG4Q9ULP0 352 aaKnown RBP13.96□□□□□ -0.17
NPHP4-201ENST00000378156 RNF215Q9Y6U7 377 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 TRBV5-4A0A0C4DH59 114 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 TEX51A0A1B0GUA7 166 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 SPDEFO95238 335 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 IDUAP35475 653 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 TAS2R31P59538 309 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 TSPAN31Q12999 210 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 FGL2Q14314 439 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 UNQ6126/PRO20091Q6UXV3 157 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 LAS2Q8IYD9 372 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 OR6T1Q8NGN1 323 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 OR14A16Q8NHC5 309 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 SLC25A44Q96H78 314 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-201ENST00000378156 NTN4Q9HB63 628 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 DHCR7Q9UBM7 475 aaKnown RBP13.96□□□□□ -0.17
NPHP4-201ENST00000378156 TBC1D29Q9UFV1 150 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 PISDQ9UG56 409 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 CLEC2DQ9UHP7 191 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF337Q9Y3M9 751 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 MICAL3Q7RTP6 2002 aa13.96□□□□□ -0.18
NPHP4-201ENST00000378156 TLCD2A6NGC4 264 aa13.96□□□□□ -0.18
NPHP4-201ENST00000378156 H0Y8X5 98 aa13.96□□□□□ -0.18
NPHP4-201ENST00000378156 AKR1C4P17516 323 aa13.96□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF385BQ569K4 471 aa13.96□□□□□ -0.18
NPHP4-201ENST00000378156 TRIP11Q15643 1979 aa13.96□□□□□ -0.18
NPHP4-201ENST00000378156 TTC3P53804 2025 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 PRR35P0CG20 571 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 PBX2P40425 430 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-201ENST00000378156 C9orf50Q5SZB4 431 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 OR2M2Q96R28 347 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 C6orf106Q9H6K1 298 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-201ENST00000378156 COQ3Q9NZJ6 369 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF264O43296 627 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 GALR3O60755 368 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-201ENST00000378156 NCR1O76036 304 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 SNAPINO95295 136 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 EPHA2P29317 976 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 NKG7Q16617 165 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 KCTD20Q7Z5Y7 419 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF683Q8IZ20 524 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 FN3KQ9H479 309 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 RNF167Q9H6Y7 350 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 SNX11Q9Y5W9 270 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 LOC102723532A0A0G2JNH3 316 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 RPS25P62851 125 aaKnown RBP13.95□□□□□ -0.18
NPHP4-201ENST00000378156 NKX6-1P78426 367 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-201ENST00000378156 ACSM3Q53FZ2 586 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 TMEM185AQ8NFB2 350 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 BABAM2Q9NXR7 383 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 RASD1Q9Y272 281 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 TRAV18A0A075B6X5 111 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 SYT7O43581 403 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 ETHE1O95571 254 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 ALDOBP05062 364 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 SCG5P05408 212 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 RPS2P15880 293 aaKnown RBP13.95□□□□□ -0.18
NPHP4-201ENST00000378156 PSMB10P40306 273 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 ALDH3B1P43353 468 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 UBE2NP61088 152 aaKnown RBP13.95□□□□□ -0.18
NPHP4-201ENST00000378156 ATAD3CQ5T2N8 411 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 AGAP7PQ5VUJ5 663 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 GPR148Q8TDV2 347 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 C4orf36Q96KX1 117 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 MED20Q9H944 212 aa13.95□□□□□ -0.18
NPHP4-201ENST00000378156 METTL15A6NJ78 407 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 SLC35E2P0CK97 266 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 PTPN6P29350 595 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 PDE7AQ13946 482 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 EIF2B1Q14232 305 aaKnown RBP13.94□□□□□ -0.18
NPHP4-201ENST00000378156 COMTD1Q86VU5 262 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 RNF113BQ8IZP6 322 aaKnown RBP13.94□□□□□ -0.18
NPHP4-201ENST00000378156 OR1J4Q8NGS1 313 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 INTS14Q96SY0 518 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 SLC6A13Q9NSD5 602 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 A6NLC8 198 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 TGFBR1P36897 503 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 PCGF3Q3KNV8 242 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 MANEAQ5SRI9 462 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 TECPR1Q7Z6L1 1165 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 CLEC1AQ8NC01 280 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 SNX18Q96RF0 628 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 RHNO1Q9BSD3 238 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 DUSP21Q9H596 190 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 UBE2ZQ9H832 354 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-201ENST00000378156 KCNJ16Q9NPI9 418 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 LRIT2A6NDA9 550 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 TPT1P13693 172 aaKnown RBP13.94□□□□□ -0.18
NPHP4-201ENST00000378156 GPR139Q6DWJ6 353 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 METAP1DQ6UB28 335 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-201ENST00000378156 IL20RBQ6UXL0 311 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF704Q6ZNC4 412 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-201ENST00000378156 ELP4Q96EB1 424 aa13.94□□□□□ -0.18
NPHP4-201ENST00000378156 ZNF582Q96NG8 517 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms