RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 RFXANKO14593 260 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 KRT33AO76009 404 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 IDO1P14902 403 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 BGNP21810 368 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 RPS4Y1P22090 263 aaKnown RBP12.97□□□□□ -0.33
HDAC6-204ENST00000376643 CXCR1P25024 350 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 TACR3P29371 465 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 CRISP3P54108 245 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 PHC1P78364 1004 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 KRTAP1-1Q07627 177 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 EPS8Q12929 822 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 SLC17A1Q14916 467 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 LARS2Q15031 903 aaKnown RBP12.97□□□□□ -0.33
HDAC6-204ENST00000376643 GABRA6Q16445 453 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 CHRFAM7AQ494W8 412 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 MRPL2Q5T653 305 aaKnown RBP12.97□□□□□ -0.33
HDAC6-204ENST00000376643 HHATQ5VTY9 493 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 MSANTD1Q6ZTZ1 278 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 ATG4DQ86TL0 474 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-204ENST00000376643 HIPK1Q86Z02 1210 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 CNOT9Q92600 299 aaKnown RBP12.97□□□□□ -0.33
HDAC6-204ENST00000376643 SORT1Q99523 831 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 SLC38A1Q9H2H9 487 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 YAE1D1Q9NRH1 226 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 THAP1Q9NVV9 213 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 ZNF232Q9UNY5 417 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 FKBP7Q9Y680 259 aa12.97□□□□□ -0.33
HDAC6-204ENST00000376643 PDLIM1O00151 329 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 HDAC3O15379 428 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 ANP32DO95626 131 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 CCNA2P20248 432 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 EDNRAP25101 427 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 LOXL1Q08397 574 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-204ENST00000376643 SYPL1Q16563 259 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 CEP85LQ5SZL2 805 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 OTUD3Q5T2D3 398 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-204ENST00000376643 ATG16L1Q676U5 607 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 WBP2NLQ6ICG8 309 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 C11orf71Q6IPW1 123 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 OLIG3Q7RTU3 272 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 CCDC103Q8IW40 242 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 ANKFN1Q8N957 763 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.33
HDAC6-204ENST00000376643 RAD21L1Q9H4I0 556 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 SLC17A5Q9NRA2 495 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 LPAR3Q9UBY5 353 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 GDF2Q9UK05 429 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-204ENST00000376643 CDC42EP3Q9UKI2 254 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 ATP23Q9Y6H3 246 aa12.96□□□□□ -0.33
HDAC6-204ENST00000376643 PRR14LQ5THK1 2151 aa12.96□□□□□ -0.34
HDAC6-204ENST00000376643 CADP27708 2225 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 TMEM72A0PK05 275 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 ELOA3DA6NLF2 546 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-204ENST00000376643 A8MVM7 634 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 E7EQL1 145 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 CHRM4P08173 479 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 ITGA5P08648 1049 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 APOBEC3AP31941 199 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-204ENST00000376643 UFM1P61960 85 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 BST1Q10588 318 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 ELOA3BQ3SY89 546 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 RNF220Q5VTB9 566 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 TMEM225Q6GV28 225 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 HMBOX1Q6NT76 420 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 AAED1Q7RTV5 226 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 MAPK1IP1LQ8NDC0 245 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 ELOA3Q8NG57 546 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 OR10H5Q8NGA6 315 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 FAM168AQ92567 244 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 PROX1Q92786 737 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 SLC35B4Q969S0 331 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 ZG16BQ96DA0 208 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 BOD1Q96IK1 185 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 TNFRSF13CQ96RJ3 184 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 MDFIQ99750 246 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 C20orf27Q9GZN8 174 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 ADAM19Q9H013 955 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 MYOZ1Q9NP98 299 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-204ENST00000376643 TMEM45AQ9NWC5 275 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 TMEM160Q9NX00 188 aa12.95□□□□□ -0.34
HDAC6-204ENST00000376643 CHD3Q12873 2000 aaKnown RBP12.95□□□□□ -0.34
HDAC6-204ENST00000376643 CDHR4A6H8M9 788 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 LIPT2A6NK58 231 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 AQP7P3A6NL99 342 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 CLDN24A6NM45 220 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 VSTM5A8MXK1 200 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 ZNF587BE7ETH6 402 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 SDHDO14521 159 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 AP3D1O14617 1153 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 BCAS1O75363 584 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-204ENST00000376643 SLC22A3O75751 556 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 ZCCHC18P0CG32 403 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 IMPDH2P12268 514 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 NCF2P19878 526 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-204ENST00000376643 GTF2E2P29084 291 aaKnown RBP12.94□□□□□ -0.34
HDAC6-204ENST00000376643 EFNA4P52798 201 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 SH3BGRP55822 239 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-204ENST00000376643 NME5P56597 212 aa12.94□□□□□ -0.34
HDAC6-204ENST00000376643 UBE2NP61088 152 aaKnown RBP12.94□□□□□ -0.34
HDAC6-204ENST00000376643 IRX1P78414 480 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms