RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 BEST4Q8NFU0 473 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 ZNRF4Q8WWF5 429 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 HOXB13Q92826 284 aaPredicted RBP13.36□□□□□ -0.27
MSH5-201ENST00000375703 LRFN5Q96NI6 719 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 CCDC3Q9BQI4 270 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 C7orf50Q9BRJ6 194 aaKnown RBP13.36□□□□□ -0.27
MSH5-201ENST00000375703 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
MSH5-201ENST00000375703 UCKL1Q9NWZ5 548 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 SCML1Q9UN30 329 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 SRMP19623 302 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 S1PR1P21453 382 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 HNRNPA2B1P22626 353 aaKnown RBP13.36□□□□□ -0.27
MSH5-201ENST00000375703 DIO1P49895 249 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 PER3P56645 1201 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 GGTLC2Q14390 218 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 OR11H4Q8NGC9 324 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 OR14A16Q8NHC5 309 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 TTC9Q92623 222 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 NMNAT3Q96T66 252 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 MFRPQ9BY79 579 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 FBRSQ9HAH7 460 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 DIABLOQ9NR28 239 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 DZANK1Q9NVP4 752 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 B3GNT2Q9NY97 397 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 NCDNQ9UBB6 729 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 CPNE7Q9UBL6 633 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 A0A0J9YY10 115 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 GSTZ1O43708 216 aaPredicted RBP13.35□□□□□ -0.27
MSH5-201ENST00000375703 WNT1P04628 370 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 RAG2P55895 527 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 DYRK1AQ13627 763 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 ST3GAL2Q16842 350 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 UNQ9370/PRO34162Q6UXP9 181 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 CMTM4Q8IZR5 234 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 FAM109AQ8N4B1 249 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 OR9A4Q8NGU2 314 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 OR51Q1Q8NH59 317 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 RPLP0P6Q8NHW5 317 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 LGALS14Q8TCE9 139 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 GIMAP1Q8WWP7 306 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 LMF2Q9BU23 707 aaKnown RBP13.35□□□□□ -0.27
MSH5-201ENST00000375703 ACTR6Q9GZN1 396 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 LMAN2LQ9H0V9 348 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 NOX4Q9NPH5 578 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 PCDHGA9Q9Y5G4 932 aaKnown RBP13.35□□□□□ -0.27
MSH5-201ENST00000375703 A0A1W2PQ72 361 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 ZNF879B4DU55 563 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 CTDSPLO15194 276 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 HCRTR1O43613 425 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 SELENOFO60613 162 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 CD1AP06126 327 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 ILF3Q12906 894 aaKnown RBP eCLIP13.35□□□□□ -0.278e-7■■□□□ 11.6
MSH5-201ENST00000375703 KLF9Q13886 244 aaPredicted RBP13.35□□□□□ -0.27
MSH5-201ENST00000375703 FAM53BQ14153 422 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 UBE2NLQ5JXB2 153 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 TEX261Q6UWH6 196 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 DPY19L2P2Q6ZN68 376 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 NPEPL1Q8NDH3 523 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 ANGPTL6Q8NI99 470 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 RIT1Q92963 219 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 MRPL48Q96GC5 212 aaKnown RBP13.35□□□□□ -0.27
MSH5-201ENST00000375703 RBM18Q96H35 190 aaKnown RBP13.35□□□□□ -0.27
MSH5-201ENST00000375703 DERL3Q96Q80 235 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 COPS3Q9UNS2 423 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 U3KQ87 197 aa13.35□□□□□ -0.27
MSH5-201ENST00000375703 IMPA2O14732 288 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 SDHBP21912 280 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 UQCRC1P31930 480 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 GDNFP39905 211 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 GPR143P51810 404 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 FGFBP1Q14512 234 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 SFTPA2Q8IWL1 248 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 CMIPQ8IY22 773 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 RCBTB1Q8NDN9 531 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 OR6K6Q8NGW6 343 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 SMIM4Q8WVI0 70 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 ORAI1Q96D31 301 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 HSPA12BQ96MM6 686 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 AUNIPQ9H7T9 357 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 BEX1Q9HBH7 125 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 NKIRAS2Q9NYR9 191 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 MRPL15Q9P015 296 aaKnown RBP13.34□□□□□ -0.27
MSH5-201ENST00000375703 UNC80Q8N2C7 3258 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 DNAH14Q0VDD8 3507 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 HRKO00198 91 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 GPR171O14626 319 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 SSNA1O43805 119 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 EGFP01133 1207 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 SRSF5Q13243 272 aaKnown RBP13.34□□□□□ -0.27
MSH5-201ENST00000375703 ESCO2Q56NI9 601 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 TMEM31Q5JXX7 168 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 HES5Q5TA89 166 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 LINGO2Q7L985 606 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 OR56B4Q8NH76 319 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 CMTM3Q96MX0 182 aa13.34□□□□□ -0.27
MSH5-201ENST00000375703 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms