RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 GPX7Q96SL4 187 aaPredicted RBP17.85■□□□□ 0.45
HDAC1-201ENST00000373548 SPSB2Q99619 263 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 KCNS3Q9BQ31 491 aa17.85■□□□□ 0.45
HDAC1-201ENST00000373548 WDR77Q9BQA1 342 aaPredicted RBP17.85■□□□□ 0.45
HDAC1-201ENST00000373548 PPIEQ9UNP9 301 aaKnown RBP17.85■□□□□ 0.45
HDAC1-201ENST00000373548 VPS13AQ96RL7 3174 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 A0A075B6Q4 140 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 OR6C70A6NIJ9 312 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 NTN3O00634 580 aaPredicted RBP17.84■□□□□ 0.45
HDAC1-201ENST00000373548 CELP19835 753 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 ERVK-25P63136 954 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 GALEQ14376 348 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 CLPPQ16740 277 aaPredicted RBP17.84■□□□□ 0.45
HDAC1-201ENST00000373548 RGS21Q2M5E4 152 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 VASNQ6EMK4 673 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 PAPD4Q6PIY7 484 aaKnown RBP17.84■□□□□ 0.45
HDAC1-201ENST00000373548 DCDC5Q6ZRR9 648 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 CHPT1Q8WUD6 406 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 KTI12Q96EK9 354 aaPredicted RBP17.84■□□□□ 0.45
HDAC1-201ENST00000373548 KATNB1Q9BVA0 655 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 NANSQ9NR45 359 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 INPP5EQ9NRR6 644 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 FBXO4Q9UKT5 387 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 HIF3AQ9Y2N7 669 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 TAF4O00268 1085 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 ADAM10O14672 748 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 ZNF354AO60765 605 aaPredicted RBP17.84■□□□□ 0.45
HDAC1-201ENST00000373548 CDRT1O95170 752 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 FGF5P12034 268 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 CALRP27797 417 aaKnown RBP17.84■□□□□ 0.45
HDAC1-201ENST00000373548 AQP2P41181 271 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 PSPHP78330 225 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 ATP1A4Q13733 1029 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 ISXQ2M1V0 245 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 TUBA3EQ6PEY2 450 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 CENPSQ8N2Z9 138 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 DTWD2Q8NBA8 298 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 ATP6V1C2Q8NEY4 427 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 OR5W2Q8NH69 310 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 DDOQ99489 341 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 AKIRIN1Q9H9L7 192 aaPredicted RBP17.84■□□□□ 0.45
HDAC1-201ENST00000373548 KLHL1Q9NR64 748 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 NPFFR2Q9Y5X5 522 aa17.84■□□□□ 0.45
HDAC1-201ENST00000373548 NCOR1O75376 2440 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 TRDV1A0A1B0GX56 115 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 BLOC1S5-TXNDC5H3BN57 136 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 CTDSP2O14595 271 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 IL1AP01583 271 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 ASAH2BP0C7U1 165 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 CD40LGP29965 261 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 FGF9P31371 208 aaPredicted RBP17.83■□□□□ 0.45
HDAC1-201ENST00000373548 RORCP51449 518 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 DUSP3P51452 185 aaPredicted RBP17.83■□□□□ 0.45
HDAC1-201ENST00000373548 NRG3P56975 720 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 MXD1Q05195 221 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 LPAL2Q16609 132 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 C11orf91Q3C1V1 193 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 LRRC75AQ8NAA5 344 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 SYT14Q8NB59 555 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 NPEPL1Q8NDH3 523 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 THAP3Q8WTV1 239 aaPredicted RBP17.83■□□□□ 0.45
HDAC1-201ENST00000373548 SMAP2Q8WU79 429 aaPredicted RBP17.83■□□□□ 0.45
HDAC1-201ENST00000373548 SMPDL3BQ92485 455 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 RASD2Q96D21 266 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 KCTD7Q96MP8 289 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 DCLRE1CQ96SD1 692 aaKnown RBP17.83■□□□□ 0.45
HDAC1-201ENST00000373548 SMOC1Q9H4F8 434 aa17.83■□□□□ 0.45
HDAC1-201ENST00000373548 MEN1O00255 615 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 WISP1O95388 367 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 NUDT14O95848 222 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 PGCP20142 388 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 TGM4P49221 684 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 BDH1Q02338 343 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 ZNF85Q03923 595 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 ARIH2OSQ8N7S6 290 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 NUBPLQ8TB37 319 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 ZPLD1Q8TCW7 415 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 ZMYND19Q96E35 227 aaPredicted RBP17.83■□□□□ 0.44
HDAC1-201ENST00000373548 NMNAT3Q96T66 252 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 CRB3Q9BUF7 120 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 TMED9Q9BVK6 235 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 SLC26A1Q9H2B4 701 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 TPK1Q9H3S4 243 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 SMURF1Q9HCE7 757 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 BABAM2Q9NXR7 383 aa17.83■□□□□ 0.44
HDAC1-201ENST00000373548 IMPA2O14732 288 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 IDH3BO43837 385 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 CDC40O60508 579 aaKnown RBP eCLIP17.82■□□□□ 0.44
HDAC1-201ENST00000373548 SYPP08247 313 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 CLEC2LP0C7M8 214 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 UQCRC1P31930 480 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 POU4F2Q12837 409 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 IL11RAQ14626 422 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 TBC1D25Q3MII6 688 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 NUP54Q7Z3B4 507 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 CPEB2Q7Z5Q1 589 aaKnown RBP17.82■□□□□ 0.44
HDAC1-201ENST00000373548 BPHLQ86WA6 291 aaPredicted RBP17.82■□□□□ 0.44
HDAC1-201ENST00000373548 TAAR8Q969N4 342 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 SLC25A46Q96AG3 418 aa17.82■□□□□ 0.44
HDAC1-201ENST00000373548 LPAR4Q99677 370 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms