RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SENP5Q96HI0 755 aaPredicted RBP13.59□□□□□ -0.23
LMO4-201ENST00000370542 FCRL1Q96LA6 429 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 CDK15Q96Q40 435 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 ARPC5LQ9BPX5 153 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 FAM173AQ9BQD7 235 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 ASPNQ9BXN1 380 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 TTTY12Q9BZ98 90 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 OR8D2Q9GZM6 311 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 OR51B5Q9H339 312 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 RNF121Q9H920 327 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 DMRT3Q9NQL9 472 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 SPACA6W5XKT8 324 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 HCFC1P51610 2035 aa13.59□□□□□ -0.23
LMO4-201ENST00000370542 INTS1Q8N201 2190 aaKnown RBP13.58□□□□□ -0.24
LMO4-201ENST00000370542 A0A0G2JMM0 328 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 A0A1W2PPB8 328 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 A0A1W2PRS3 328 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 KIR3DP1A8MWS1 328 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 NOS1APO75052 506 aaPredicted RBP13.58□□□□□ -0.24
LMO4-201ENST00000370542 TPOP07202 933 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 GALNSP34059 522 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 RFX2P48378 723 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 GZMKP49863 264 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 KRTAP10-9P60411 292 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 PPIAP62937 165 aaKnown RBP13.58□□□□□ -0.24
LMO4-201ENST00000370542 VLDLRP98155 873 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 PLIN5Q00G26 463 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 RBBP4Q09028 425 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 FAPQ12884 760 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 PPP1R8Q12972 351 aaKnown RBP13.58□□□□□ -0.24
LMO4-201ENST00000370542 SLAMF1Q13291 335 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 ZNF750Q32MQ0 723 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 ZNF791Q3KP31 576 aaPredicted RBP13.58□□□□□ -0.24
LMO4-201ENST00000370542 SLC35F1Q5T1Q4 408 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 PDZK1Q5T2W1 519 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 ANXA8L1Q5VT79 327 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 DNAJC14Q6Y2X3 702 aaPredicted RBP13.58□□□□□ -0.24
LMO4-201ENST00000370542 ZNF782Q6ZMW2 699 aaPredicted RBP13.58□□□□□ -0.24
LMO4-201ENST00000370542 SPATC1Q76KD6 591 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 C9orf40Q8IXQ3 194 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 L3MBTL4Q8NA19 623 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 VPS37AQ8NEZ2 397 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 OR10G2Q8NGC3 310 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 CA5BP1Q8WTZ4 195 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 ASB5Q8WWX0 329 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 RGMAQ96B86 450 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 CENPOQ9BU64 300 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 DOHHQ9BU89 302 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 MED18Q9BUE0 208 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 TAPBPLQ9BX59 468 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 DDX31Q9H8H2 851 aaKnown RBP13.58□□□□□ -0.24
LMO4-201ENST00000370542 COQ3Q9NZJ6 369 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 SSR3Q9UNL2 185 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 ASB4Q9Y574 426 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 V9GYH0 126 aa13.58□□□□□ -0.24
LMO4-201ENST00000370542 LOC105371267A0A1B0GV96 52 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 IRGMA1A4Y4 181 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 ZNF670-ZNF695F2Z2N8 137 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 hCG_2039718K7EN88 272 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 ACOT7O00154 380 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 SUSD5O60279 629 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 CDC40O60508 579 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMO4-201ENST00000370542 ZNF780AO75290 641 aaPredicted RBP13.57□□□□□ -0.24
LMO4-201ENST00000370542 TNNI3P19429 210 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 CHMP24386 653 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 BSGP35613 385 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 SSR2P43308 183 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 TNFRSF17Q02223 184 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 C1DQ13901 141 aaKnown RBP13.57□□□□□ -0.24
LMO4-201ENST00000370542 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
LMO4-201ENST00000370542 MICAQ29983 383 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 GTDC1Q4AE62 458 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 GXYLT1Q4G148 440 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 IQCCQ4KMZ1 466 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 DGAT2L6Q6ZPD8 337 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 RFPL4BQ6ZWI9 263 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 CDH24Q86UP0 819 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 RNF175Q8N4F7 328 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 TMEM251Q8N6I4 163 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 ANKK1Q8NFD2 765 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 OR8J2Q8NGG1 315 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 WDR20Q8TBZ3 569 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 ENKURQ8TC29 256 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 PAQR8Q8TEZ7 354 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 DNAJA4Q8WW22 397 aaPredicted RBP13.57□□□□□ -0.24
LMO4-201ENST00000370542 C7orf34Q96L11 122 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 TMUB1Q9BVT8 246 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 SORBS1Q9BX66 1292 aaKnown RBP13.57□□□□□ -0.24
LMO4-201ENST00000370542 DEFB127Q9H1M4 99 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 BTNL2Q9UIR0 455 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 ATG4BQ9Y4P1 393 aa13.57□□□□□ -0.24
LMO4-201ENST00000370542 A0A0A6YYD5 115 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 FOXE1O00358 373 aaPredicted RBP13.56□□□□□ -0.24
LMO4-201ENST00000370542 PDPK1O15530 556 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 SNAPC5O75971 98 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 TOXO94900 526 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 CCNB2O95067 398 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 PTHP01270 115 aa13.56□□□□□ -0.24
LMO4-201ENST00000370542 CCL3P10147 92 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms