RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TBPL2Q6SJ96 375 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 MEPCEQ7L2J0 689 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 YRDCQ86U90 279 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 ARRDC2Q8TBH0 407 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 FRZBQ92765 325 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 C7orf50Q9BRJ6 194 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 LANCL2Q9NS86 450 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 DDX60Q8IY21 1712 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF587BE7ETH6 402 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 MT-CO2P00403 227 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 IGHEP01854 428 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 RFC3P40938 356 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 VEGFCP49767 419 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF417Q8TAU3 575 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 MSI2Q96DH6 328 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF578Q96N58 590 aaPredicted RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 OR51E2Q9H255 320 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 PRMT8Q9NR22 394 aaPredicted RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 PRAMEF4O60810 478 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF254O75437 659 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 KCNK5O95279 499 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 CD27P26842 260 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 IMPA1P29218 277 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 MGAT3Q09327 533 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 CDK5R2Q13319 367 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SULF2Q8IWU5 870 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SIMC1Q8NDZ2 872 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 TRIB1Q96RU8 372 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SDR39U1Q9NRG7 319 aaPredicted RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 DCAF13Q9NV06 445 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 TBCCD1Q9NVR7 557 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 PAQR5Q9NXK6 330 aaPredicted RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 TOPAZ1Q8N9V7 1692 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ARPC5O15511 151 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 SLC36A2Q495M3 483 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 PRSS48Q7RTY5 328 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF679Q8IYX0 411 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF740Q8NDX6 193 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF420Q8TAQ5 688 aaPredicted RBP7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ZFPM2Q8WW38 1151 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 PRR14Q9BWN1 585 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TAS2R8Q9NYW2 309 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TMEM9Q9P0T7 183 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 THAP10Q9P2Z0 257 aaPredicted RBP7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TMED7-TICAM2A0A0A6YYA0 188 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TMEM127O75204 238 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 SNAPC5O75971 98 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TNFSF15O95150 251 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 KLKB1P03952 638 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ARAFP10398 606 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 BCL6P41182 706 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ADPRHP54922 357 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 LGALS4P56470 323 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TAS2R20P59543 309 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 GNB1P62873 340 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 CCSMST1Q4G0I0 132 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 C14orf28Q4W4Y0 310 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 C8orf44Q96CB5 159 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 SORT1Q99523 831 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 PHF7Q9BWX1 381 aaPredicted RBP7.94□□□□□ -1.14
ABCA4-201ENST00000370225 COQ3Q9NZJ6 369 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 GNG12Q9UBI6 72 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 USP22Q9UPT9 525 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TMED7Q9Y3B3 224 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TAF1P21675 1872 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 BTAF1O14981 1849 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 OR7A17O14581 309 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ABHD16AO95870 558 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 HOXB5P09067 269 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 OR8G3PP0DMU2 310 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 HTR2AP28223 471 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 SCGB2A2Q13296 93 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 AADACL3Q5VUY0 350 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 SERPINA11Q86U17 422 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 RAB39BQ96DA2 213 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 CLMPQ9H6B4 373 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 EFSO43281 561 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 HCRTR1O43613 425 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 DCAF7P61962 342 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 NPSR1Q6W5P4 371 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 KDM8Q8N371 416 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ELSPBP1Q96BH3 223 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 SORCS2Q96PQ0 1159 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 CMSS1Q9BQ75 279 aaKnown RBP7.94□□□□□ -1.14
ABCA4-201ENST00000370225 PITHD1Q9GZP4 211 aaPredicted RBP7.94□□□□□ -1.14
ABCA4-201ENST00000370225 HS3ST2Q9Y278 367 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 URB1O60287 2271 aaKnown RBP7.94□□□□□ -1.14
ABCA4-201ENST00000370225 MEGF11A6BM72 1044 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TLCD2A6NGC4 264 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 NOTOA8MTQ0 251 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 D6RAR5 112 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 ALOX12BO75342 701 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 NXPH2O95156 264 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 APOC3P02656 99 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 IFNA4P05014 189 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 AKAIN1P0CW23 69 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 HOXA9P31269 272 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 GABARAPL2P60520 117 aa7.94□□□□□ -1.14
ABCA4-201ENST00000370225 TRA2BP62995 288 aaKnown RBP7.94□□□□□ -1.14
ABCA4-201ENST00000370225 SLC35A1P78382 337 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms