RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PAHP00439 452 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 EIF4EP06730 217 aaKnown RBP10.61□□□□□ -0.71
USF1-201ENST00000368019 SSR2P43308 183 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 RGS8P57771 180 aaPredicted RBP10.61□□□□□ -0.71
USF1-201ENST00000368019 RPS7P62081 194 aaKnown RBP10.61□□□□□ -0.71
USF1-201ENST00000368019 SNRPD2P62316 118 aaKnown RBP10.61□□□□□ -0.71
USF1-201ENST00000368019 CSNK1G2P78368 415 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 CCL7P80098 99 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 TGM3Q08188 693 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 EIF3IQ13347 325 aaKnown RBP10.61□□□□□ -0.71
USF1-201ENST00000368019 CAMK2DQ13557 499 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 NFATC4Q14934 902 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 SLC9A5Q14940 896 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 MAPK14Q16539 360 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 SLC36A2Q495M3 483 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 ELFN2Q5R3F8 820 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 SLC30A6Q6NXT4 461 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 SEZ6L2Q6UXD5 910 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 PLEKHM3Q6ZWE6 761 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 UTS2BQ765I0 119 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 AMZ2Q86W34 360 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 SLITRK4Q8IW52 837 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 SAMD14Q8IZD0 417 aaPredicted RBP10.61□□□□□ -0.71
USF1-201ENST00000368019 LNX2Q8N448 690 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 ZFP41Q8N8Y5 198 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 FAM98AQ8NCA5 519 aaKnown RBP10.61□□□□□ -0.71
USF1-201ENST00000368019 FAM71CQ8NEG0 241 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 OR52L1Q8NGH7 329 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 OR5D16Q8NGK9 328 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 OR5W2Q8NH69 310 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 PMM1Q92871 262 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 YIPF5Q969M3 257 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 CCDC74AQ96AQ1 378 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 PHF21AQ96BD5 680 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 MAP6Q96JE9 813 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 OR7D2Q96RA2 312 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 NDC1Q9BTX1 674 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 APOOQ9BUR5 198 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 ACTRT3Q9BYD9 372 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 TMEM168Q9H0V1 697 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 WDR70Q9NW82 654 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 UBQLN2Q9UHD9 624 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 KIF25Q9UIL4 384 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 ATXN7L1Q9ULK2 861 aaPredicted RBP10.61□□□□□ -0.71
USF1-201ENST00000368019 SPEF1Q9Y4P9 236 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 NINQ8N4C6 2090 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 UBR5O95071 2799 aaPredicted RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 C2orf92A0A1B0GVN3 265 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 LRIT2A6NDA9 550 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 D6RAR5 112 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 LRRN3E7EW58 273 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 BTN3A3O00478 584 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 SULT1B1O43704 296 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 KCNJ13O60928 360 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 FZD7O75084 574 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 GATBO75879 557 aaKnown RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 RCBTB2O95199 551 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 TGM6O95932 706 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 HMGN2P05204 90 aaKnown RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 CHRM5P08912 532 aaPredicted RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 H2AFB2P0C5Z0 115 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 CCKBRP32239 447 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 ATP6V1E1P36543 226 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 GCGRP47871 477 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 NRG3P56975 720 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 SRP54P61011 504 aaKnown RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 SNTA1Q13424 505 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 LASP1Q14847 261 aaKnown RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 GSG1Q2KHT4 349 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 BCL2L15Q5TBC7 163 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 METRNLQ641Q3 311 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 SLC48A1Q6P1K1 146 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 OGFOD3Q6PK18 319 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 ENPP7Q6UWV6 458 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 RAB11FIP2Q7L804 512 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 SHFQ7M4L6 423 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 OVCH1Q7RTY7 1134 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 GDF7Q7Z4P5 450 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 LRRTM4Q86VH4 590 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 BPHLQ86WA6 291 aaPredicted RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 GPR135Q8IZ08 494 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 TOMM5Q8N4H5 51 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 SIRT6Q8N6T7 355 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 OR5AR1Q8NGP9 310 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 TRMT10AQ8TBZ6 339 aaKnown RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 COL26A1Q96A83 441 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 SLC41A3Q96GZ6 507 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 IL17FQ96PD4 163 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 CCNL2Q96S94 520 aaPredicted RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 MCHR1Q99705 422 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 PPIL3Q9H2H8 161 aaKnown RBP10.6□□□□□ -0.71
USF1-201ENST00000368019 UBQLN3Q9H347 655 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 LRRN3Q9H3W5 708 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 CNIH4Q9P003 139 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 CES1P1Q9UKY3 287 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 ACSL5Q9ULC5 683 aa10.6□□□□□ -0.71
USF1-201ENST00000368019 SDK2Q58EX2 2172 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 PTPN13Q12923 2485 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 DAPL1A0PJW8 107 aa10.59□□□□□ -0.71
USF1-201ENST00000368019 SMIM30A4D0T7 59 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms