RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SEC61A1P61619 476 aaKnown RBP17.23■□□□□ 0.35
CLIP2-202ENST00000361545 EXT1Q16394 746 aa17.23■□□□□ 0.35
CLIP2-202ENST00000361545 BEST3Q8N1M1 668 aa17.23■□□□□ 0.35
CLIP2-202ENST00000361545 OR7G1Q8NGA0 311 aa17.23■□□□□ 0.35
CLIP2-202ENST00000361545 HAVCR2Q8TDQ0 301 aa17.23■□□□□ 0.35
CLIP2-202ENST00000361545 TMEM68Q96MH6 324 aa17.23■□□□□ 0.35
CLIP2-202ENST00000361545 ZNF285Q96NJ3 590 aa17.23■□□□□ 0.35
CLIP2-202ENST00000361545 SYT3Q9BQG1 590 aa17.23■□□□□ 0.35
CLIP2-202ENST00000361545 ARID1BQ8NFD5 2236 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-202ENST00000361545 ZNF593O00488 134 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-202ENST00000361545 SERPINA2P20848 420 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 DLSTP36957 453 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 OPRD1P41143 372 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 GPR85P60893 370 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 SMN1Q16637 294 aaKnown RBP17.22■□□□□ 0.35
CLIP2-202ENST00000361545 RNF113BQ8IZP6 322 aaKnown RBP17.22■□□□□ 0.35
CLIP2-202ENST00000361545 NUDT8Q8WV74 236 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 TFAP2CQ92754 450 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 OR14J1Q9UGF5 321 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 GPR160Q9UJ42 338 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 DAPP1Q9UN19 280 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 LOC105369274A0A096LPK9 316 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 ENPP1P22413 925 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 OR4N4Q8N0Y3 316 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 OR5M1Q8NGP8 315 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 NRG4Q8WWG1 115 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 C8orf44Q96CB5 159 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 AGAP5A6NIR3 686 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 CDK1P06493 297 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 OR8G3PP0DMU2 310 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 AGBL4Q5VU57 503 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-202ENST00000361545 MAVSQ7Z434 540 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 ETFBKMTQ8IXQ9 262 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 ZNF587Q96SQ5 575 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-202ENST00000361545 RPP25Q9BUL9 199 aaKnown RBP17.22■□□□□ 0.35
CLIP2-202ENST00000361545 PRAMEF25A6NGN4 478 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 IDSB3KWA1 339 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 GABRA2P47869 451 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 HBMQ6B0K9 141 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 MKXQ8IYA7 352 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 EDEM2Q9BV94 578 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 TUBB1Q9H4B7 451 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 TRAV36DV7A0A075B6V5 113 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 EPHA1P21709 976 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 RGS19P49795 217 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 COL28A1Q2UY09 1125 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 CCBE1Q6UXH8 406 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-202ENST00000361545 TMEM255BQ8WV15 326 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 BABAM2Q9NXR7 383 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 RDH8Q9NYR8 311 aa17.22■□□□□ 0.35
CLIP2-202ENST00000361545 TMEM184BQ9Y519 407 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-202ENST00000361545 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 NRG2O14511 850 aaPredicted RBP17.21■□□□□ 0.35
CLIP2-202ENST00000361545 LYRM4Q9HD34 91 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 NGBQ9NPG2 151 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 B3GNT8Q7Z7M8 397 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 SPNS2Q8IVW8 549 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 CHDHQ8NE62 594 aaPredicted RBP17.21■□□□□ 0.35
CLIP2-202ENST00000361545 NMNAT3Q96T66 252 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 NELFAQ9H3P2 528 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 A6NIN4 97 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 GFYI3L273 518 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 ITGAMP11215 1152 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 MTHFD2P13995 350 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 OR2G6Q5TZ20 316 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 TEX37Q96LM6 180 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 C12orf49Q9H741 205 aa17.21■□□□□ 0.35
CLIP2-202ENST00000361545 TMEM72A0PK05 275 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 DOK2O60496 412 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 PTHP01270 115 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 ELAVL1Q15717 326 aaKnown RBP17.21■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF585AQ6P3V2 769 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 MTFR2Q6P444 385 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 CNIH2Q6PI25 160 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 MBOAT2Q6ZWT7 520 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 SYNPRQ8TBG9 265 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 TMEM9BQ9NQ34 198 aa17.21■□□□□ 0.34
CLIP2-202ENST00000361545 RP2O75695 350 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 CD34P28906 385 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 EPHA5P54756 1037 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 SPARTQ8N0X7 666 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 MED16Q9Y2X0 877 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 ACP2P11117 423 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 GFERP55789 205 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 ZNF91Q05481 1191 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 FAM109BQ6ICB4 259 aaPredicted RBP17.2■□□□□ 0.34
CLIP2-202ENST00000361545 NDUFAF7Q7L592 441 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 CD300LFQ8TDQ1 290 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 TXNDC15Q96J42 360 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 B3GNT2Q9NY97 397 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 EDN3P14138 238 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 DNASE1P24855 282 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 ATP1B3P54709 279 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 MZT1Q08AG7 82 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 OR6T1Q8NGN1 323 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 ALG12Q9BV10 488 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 TBCCD1Q9NVR7 557 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 I3L521 148 aa17.2■□□□□ 0.34
CLIP2-202ENST00000361545 ACVR1Q04771 509 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms