RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.71■□□□□ 0.276e-6■□□□□ 8.6
PDLIM7-203ENST00000359895 CBLN3Q6UW01 205 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 ZNF441Q8N8Z8 693 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 SDR9C7Q8NEX9 313 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 SNRNP27Q8WVK2 155 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 OMA1Q96E52 524 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 MRPL48Q96GC5 212 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 TIMP4Q99727 224 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 ADAM19Q9H013 955 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 CPNE5Q9HCH3 593 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 PRMT8Q9NR22 394 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 CTSFQ9UBX1 484 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 ATXN7L1Q9ULK2 861 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 HIF3AQ9Y2N7 669 aa16.71■□□□□ 0.27
PDLIM7-203ENST00000359895 CABIN1Q9Y6J0 2220 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 LY6G6EA0A0G2JKS1 128 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 IMPA2O14732 288 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 CASKO14936 926 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 NDUFB5O43674 189 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 SIGLEC6O43699 453 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 PTTG1O95997 202 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 HNRNPCP07910 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 MRPL3P09001 348 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 CLUP10909 449 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 APEHP13798 732 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 CFL1P23528 166 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 F8A1P23610 371 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 GTF2E2P29084 291 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 RANBP1P43487 201 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 DNASE1L3Q13609 305 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 DDI2Q5TDH0 399 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 LSRQ86X29 649 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 C10orf53Q8N6V4 93 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 POC5Q8NA72 575 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 FAM83FQ8NEG4 500 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 OR5W2Q8NH69 310 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 STT3BQ8TCJ2 826 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 ASB15Q8WXK1 588 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 NAT6Q93015 286 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 TP53INP1Q96A56 240 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 CNN2Q99439 309 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 TBL1XR1Q9BZK7 514 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 NANSQ9NR45 359 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 ZNF229Q9UJW7 825 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 U3KQA8 63 aa16.7■□□□□ 0.26
PDLIM7-203ENST00000359895 LRRN3E7EW58 273 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 PLPP2O43688 288 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 CDC40O60508 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 OR2T7P0C7T2 308 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 TDGF1P13385 188 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 PGCP20142 388 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 CCL7P80098 99 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 ZNF85Q03923 595 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 ZNF117Q03924 483 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 IL10RAQ13651 578 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 PON3Q15166 354 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 HLA-BQ31612 363 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 VASNQ6EMK4 673 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 FAAH2Q6GMR7 532 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 TMPRSS9Q7Z410 1059 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 OR2T27Q8NH04 317 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 NEIL3Q8TAT5 605 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 EDAQ92838 391 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 HDHD5Q9BXW7 423 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 NRSN2Q9GZP1 204 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 LRRN3Q9H3W5 708 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 MMP25Q9NPA2 562 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 SLC22A11Q9NSA0 550 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 RARRES3Q9UL19 164 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 EXPH5Q8NEV8 1989 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 ADAMTS9Q9P2N4 1935 aa16.69■□□□□ 0.26
PDLIM7-203ENST00000359895 LRRTM2O43300 516 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 HCRTR2O43614 444 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 GYPBP06028 91 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 ABCD3P28288 659 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 TACR3P29371 465 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 DIO1P49895 249 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 ACTA2P62736 377 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 ACTG2P63267 376 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 CSTF1Q05048 431 aaKnown RBP16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 NKAIN1Q4KMZ8 207 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 AGAP7PQ5VUJ5 663 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 LANCL3Q6ZV70 420 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 VASH1Q7L8A9 365 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 LAX1Q8IWV1 398 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 SYT14Q8NB59 555 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 NPEPL1Q8NDH3 523 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 OR6C1Q96RD1 312 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 NMNAT2Q9BZQ4 307 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 FBXL4Q9UKA2 621 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 ADAM18Q9Y3Q7 739 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 IGHV5-10-1A0A0J9YXX1 117 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 A0A1W2PQL4 384 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 A0A1W2PQM1 296 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 CDC14CA4D256 554 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 HEXBP07686 556 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 CD14P08571 375 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 ASAH2BP0C7U1 165 aa16.68■□□□□ 0.26
PDLIM7-203ENST00000359895 MTNR1BP49286 362 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms