RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 RPL35P42766 123 aaKnown RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 RAB5BP61020 215 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 RAP1BP61224 184 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 RAP1AP62834 184 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 FAPQ12884 760 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 FIP1L1Q6UN15 594 aaKnown RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 ALKAL2Q6UX46 152 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 GDPD3Q7L5L3 318 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 NLRP8Q86W28 1048 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 NANOGP1Q8N7R0 232 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 ZNF511Q8NB15 262 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 ZNF649Q9BS31 505 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 NKX2-4Q9H2Z4 354 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 LSM5Q9Y4Y9 91 aaKnown RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 H3BQ06 376 aaPredicted RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 SMLR1H3BR10 107 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 IFNA5P01569 189 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 LCATP04180 440 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 BCL6P41182 706 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 PER3P56645 1201 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 KRBOX4Q5JUW0 171 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 TANGO2Q6ICL3 276 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 ZNF585AQ6P3V2 769 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 BPIFB2Q8N4F0 458 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 ZSCAN4Q8NAM6 433 aaPredicted RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 NLGN4YQ8NFZ3 816 aaPredicted RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 LYSMD1Q96S90 227 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 SYT3Q9BQG1 590 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 ZNF385DQ9H6B1 395 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 NTN4Q9HB63 628 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 FBXO8Q9NRD0 319 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 PLCXD1Q9NUJ7 323 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 VSX1Q9NZR4 365 aaPredicted RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 MAN2B1O00754 1011 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 DVL2O14641 736 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 SLC43A1O75387 559 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 PRKACBP22694 351 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 EMP2P54851 167 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 MFSD12Q6NUT3 480 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 PRRT1Q99946 306 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 COL22A1Q8NFW1 1626 aaPredicted RBP12.74□□□□□ -0.37
VCP-201ENST00000358901 PIP5K1CO60331 668 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 TSPAN15O95858 294 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 PEX11BO96011 259 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 C1QAP02745 245 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 BMP1P13497 986 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 RAB3AP20336 220 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 DAP3P51398 398 aaKnown RBP12.74□□□□□ -0.37
VCP-201ENST00000358901 CAV2P51636 162 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 MRPL58Q14197 206 aaKnown RBP12.74□□□□□ -0.37
VCP-201ENST00000358901 PPA1Q15181 289 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 C3orf33Q6P1S2 294 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 SIAH3Q8IW03 269 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 GLB1L2Q8IW92 636 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ZNF611Q8N823 705 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 OR7G1Q8NGA0 311 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 OR4M1Q8NGD0 313 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 OR52N1Q8NH53 320 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 PSD2Q9BQI7 771 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 CHST8Q9H2A9 424 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ZNF160Q9HCG1 818 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ATP13A2Q9NQ11 1180 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 B3GALT1Q9Y5Z6 326 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ZNF264O43296 627 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ETHE1O95571 254 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 HLA-AP01891 365 aaKnown RBP12.74□□□□□ -0.37
VCP-201ENST00000358901 ETV5P41161 510 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ETV1P50549 477 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 PSPHP78330 225 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
VCP-201ENST00000358901 TCTN3Q6NUS6 607 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ADAMTSL4Q6UY14 1074 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 PTOV1Q86YD1 416 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ACBD4Q8NC06 268 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 IL17RDQ8NFM7 739 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 OR5D14Q8NGL3 314 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ZDHHC5Q9C0B5 715 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 NOX4Q9NPH5 578 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 NRIP3Q9NQ35 241 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 FTSJ1Q9UET6 329 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 COL18A1P39060 1754 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 TMPRSS11DO60235 418 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 ZNF217O75362 1048 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 IFNA2P01563 188 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 TAS2R19P59542 299 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 NKG7Q16617 165 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 S100PBPQ96BU1 408 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 PLEK2Q9NYT0 353 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 REV1Q9UBZ9 1251 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 COPS3Q9UNS2 423 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 WASF3Q9UPY6 502 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 PLEKHM1Q9Y4G2 1056 aa12.74□□□□□ -0.37
VCP-201ENST00000358901 SHROOM3Q8TF72 1996 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 LRIT2A6NDA9 550 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 A6NLC8 198 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 THBS2P35442 1172 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 CCR6P51684 374 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 AKR1C2P52895 323 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 SORDQ00796 357 aa12.73□□□□□ -0.37
VCP-201ENST00000358901 ZMAT1Q5H9K5 638 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms