RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 TYW3Q6IPR3 259 aaKnown RBP7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 EMBQ6PCB8 327 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 OLIG3Q7RTU3 272 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 MEX3DQ86XN8 651 aaKnown RBP7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 DDIASQ8IXT1 998 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 ZIC4Q8N9L1 334 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 CCDC63Q8NA47 563 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 MNS1Q8NEH6 495 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 OR5AK3PQ8NH89 298 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 ANP32BQ92688 251 aaKnown RBP7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 PMM1Q92871 262 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 TMEM45BQ96B21 275 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 C1orf159Q96HA4 380 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 C3orf30Q96M34 536 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 DUSP26Q9BV47 211 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 OR11A1Q9GZK7 315 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 BPESC1Q9GZL8 116 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 PLK3Q9H4B4 646 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 PIF1Q9H611 641 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 OBP2BQ9NPH6 170 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 EXOSC3Q9NQT5 275 aaKnown RBP7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 POLE3Q9NRF9 147 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 CA10Q9NS85 328 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 EXD2Q9NVH0 621 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 GMPR2Q9P2T1 348 aaKnown RBP7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 CRNNQ9UBG3 495 aaPredicted RBP7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 UPB1Q9UBR1 384 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 GIMAP2Q9UG22 337 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 MOKQ9UQ07 419 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 SLC9A8Q9Y2E8 581 aa7.47□□□□□ -1.21
COL4A3BP-202ENST00000357457 IGHV1-18A0A0C4DH31 117 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 RNASET2O00584 256 aaKnown RBP7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 COPEO14579 308 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 CFLARO15519 480 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 TCF21O43680 179 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 SCN2BO60939 215 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 STAMBPO95630 424 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 AGR2O95994 175 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 KRT4P19013 534 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 PPOXP50336 477 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 CLDN8P56748 225 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 SNRPD2P62316 118 aaKnown RBP7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 KCNJ10P78508 379 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 C3orf36Q3SXR2 165 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 IQCCQ4KMZ1 466 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 ATP6AP1LQ52LC2 224 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 C9orf135Q5VTT2 229 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 ANKRD16Q6P6B7 361 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 PAQR6Q6TCH4 344 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 CASP12Q6UXS9 341 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 IFT20Q8IY31 132 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 FAM169BQ8N8A8 192 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 POMGNT2Q8NAT1 580 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 ZNF563Q8TA94 476 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 NAA11Q9BSU3 229 aaPredicted RBP7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 KATNB1Q9BVA0 655 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 SF3B5Q9BWJ5 86 aaKnown RBP7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 ADAM19Q9H013 955 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 MID2Q9UJV3 735 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 FBXO9Q9UK97 447 aaPredicted RBP7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 PRDM4Q9UKN5 801 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 PCDHGB4Q9UN71 923 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 PKD1L1Q8TDX9 2849 aa7.46□□□□□ -1.22
COL4A3BP-202ENST00000357457 TMED7-TICAM2A0A0A6YYA0 188 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 TMEM72A0PK05 275 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 PRAMEF27A3QJZ7 478 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 LRP5LA4QPB2 252 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 FAAHO00519 579 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 KLF11O14901 512 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 WIPF1O43516 503 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 SLU7O95391 586 aaKnown RBP7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 IGLV1-44P01699 117 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 SHBGP04278 402 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 OR4A8P0C604 315 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 OR12D1P0DN82 309 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 G6PDP11413 515 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 CFPP27918 469 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 ALDH3A1P30838 453 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 ARRB2P32121 409 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 RYKP34925 604 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 SLC1A3P43003 542 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 IDH2P48735 452 aaKnown RBP7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 IDH3GP51553 393 aaPredicted RBP7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 EMX2Q04743 252 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 FUT5Q11128 374 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 ADIPOQQ15848 244 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 DEF8Q6ZN54 512 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 FRRS1Q6ZNA5 592 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 C16orf62Q7Z3J2 963 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 SLC46A3Q7Z3Q1 461 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 CLECL1Q8IZS7 167 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 CLEC4FQ8N1N0 589 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 ARFGAP2Q8N6H7 521 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 ANKS4BQ8N8V4 417 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 LINC01356Q8N9X3 169 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 FNDC5Q8NAU1 212 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 OR8J2Q8NGG1 315 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 MAGEE2Q8TD90 523 aaPredicted RBP7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 ZFAND2BQ8WV99 257 aa7.45□□□□□ -1.22
COL4A3BP-202ENST00000357457 XAGE5Q8WWM1 108 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms