RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 KDM4EB2RXH2 506 aaPredicted RBP16.08■□□□□ 0.16
NPAS3-202ENST00000356141 E9PI62 339 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 SCG5P05408 212 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 GTF2E2P29084 291 aaKnown RBP16.08■□□□□ 0.16
NPAS3-202ENST00000356141 PYCR1P32322 319 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 RPS18P62269 152 aaKnown RBP16.08■□□□□ 0.16
NPAS3-202ENST00000356141 DCDP81605 110 aaKnown RBP16.08■□□□□ 0.16
NPAS3-202ENST00000356141 FHL1Q13642 323 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 MOGQ16653 247 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 MEDAGQ5VYS4 303 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 METTL21AQ8WXB1 218 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 Q96M85 177 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 RIIAD1A6NNX1 92 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 MEN1O00255 615 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 CDRT1O95170 752 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 RCBTB2O95199 551 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 MSL3P1P0C860 447 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 WNT4P56705 351 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 RNF4P78317 190 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 ACY1Q03154 408 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 DNASE1L3Q13609 305 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 NIPAL1Q6NVV3 410 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 NIPAL3Q6P499 406 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 ANKRD37Q7Z713 158 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 ZNF527Q8NB42 609 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 GPR119Q8TDV5 335 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 RHBDD1Q8TEB9 315 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 MR1Q95460 341 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 MVB12AQ96EY5 273 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 ABCB10Q9NRK6 738 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 PCDHGA3Q9Y5H0 932 aa16.08■□□□□ 0.16
NPAS3-202ENST00000356141 RIF1Q5UIP0 2472 aaKnown RBP16.07■□□□□ 0.16
NPAS3-202ENST00000356141 FAM47E-STBD1D6RA91 191 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 J3QLW9 94 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 HCN1O60741 890 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 ZNF19P17023 458 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 AZGP1P25311 298 aaKnown RBP16.07■□□□□ 0.16
NPAS3-202ENST00000356141 IFITM3Q01628 133 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 LTBQ06643 244 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 KLHL22Q53GT1 634 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 FAM27D1Q5T7N8 215 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 OR4D9Q8NGE8 314 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 C9orf43Q8TAL5 461 aaPredicted RBP16.07■□□□□ 0.16
NPAS3-202ENST00000356141 CDADC1Q9BWV3 514 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 ASB6Q9NWX5 421 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 OSGIN1Q9UJX0 560 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 SIRT4Q9Y6E7 314 aaPredicted RBP16.07■□□□□ 0.16
NPAS3-202ENST00000356141 A0A087WUJ7 227 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 TEX13CA0A0J9YWL9 993 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 FRG2CA6NGY1 282 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 B4DXG7 233 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 M0R296 226 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 F10P00742 488 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 PIPP12273 146 aaPredicted RBP16.07■□□□□ 0.16
NPAS3-202ENST00000356141 ACVR1BP36896 505 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 EGR4Q05215 589 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 TMPRSS11FQ6ZWK6 438 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 GRAMD2AQ8IUY3 354 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 APCDD1LQ8NCL9 501 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 OR7G1Q8NGA0 311 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 PRRG3Q9BZD7 231 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 ULBP3Q9BZM4 244 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 SIAEQ9HAT2 523 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 SRA1Q9HD15 236 aaKnown RBP16.07■□□□□ 0.16
NPAS3-202ENST00000356141 POLE3Q9NRF9 147 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 C14orf105Q9NVL8 296 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 ANKRD10Q9NXR5 420 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 MED11Q9P086 117 aa16.07■□□□□ 0.16
NPAS3-202ENST00000356141 PTP4A3O75365 173 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 IL11P20809 199 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 PSMA1P25786 263 aaKnown RBP16.06■□□□□ 0.16
NPAS3-202ENST00000356141 CRYBB2P43320 205 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 SLC3A1Q07837 685 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 RAB40BQ12829 278 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 SF3A2Q15428 464 aaKnown RBP16.06■□□□□ 0.16
NPAS3-202ENST00000356141 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.06■□□□□ 0.16
NPAS3-202ENST00000356141 PROKR2Q8NFJ6 384 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 OR13C5Q8NGS8 318 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 BRIX1Q8TDN6 353 aaKnown RBP16.06■□□□□ 0.16
NPAS3-202ENST00000356141 NR4A3Q92570 626 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 TEAD3Q99594 435 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 NANSQ9NR45 359 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 ING1Q9UK53 422 aaPredicted RBP16.06■□□□□ 0.16
NPAS3-202ENST00000356141 DAPL1A0PJW8 107 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 SNTA1Q13424 505 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 ZNF404Q494X3 552 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 TP53I3Q53FA7 332 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 PRAMEF20Q5VT98 475 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 NXNL2Q5VZ03 156 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 USP43Q70EL4 1123 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 LNX2Q8N448 690 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 LSMEM1Q8N8F7 131 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 RPRD1BQ9NQG5 326 aaKnown RBP16.06■□□□□ 0.16
NPAS3-202ENST00000356141 ERVK13-1Q9NX77 482 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 SLC6A5Q9Y345 797 aa16.06■□□□□ 0.16
NPAS3-202ENST00000356141 A0A087WV48 116 aa16.05■□□□□ 0.16
NPAS3-202ENST00000356141 A6NL46 340 aa16.05■□□□□ 0.16
NPAS3-202ENST00000356141 SELENOFO60613 162 aa16.05■□□□□ 0.16
NPAS3-202ENST00000356141 HMGN1P05114 100 aa16.05■□□□□ 0.16
NPAS3-202ENST00000356141 FABP5Q01469 135 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms