RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SPPL3Q8TCT6 385 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 RNF128Q8TEB7 428 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 INPP5EQ9NRR6 644 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SERTAD4Q9NUC0 356 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ANKRD10Q9NXR5 420 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 CNOT2Q9NZN8 540 aaKnown RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 WIF1Q9Y5W5 379 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 PRICKLE3O43900 615 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 GABRB3P28472 473 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 CCL11P51671 97 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 RPL23AP62750 156 aaKnown RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 FAM69AQ5T7M9 428 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 STEAP2Q8NFT2 490 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 CPPED1Q9BRF8 314 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 OR51J1Q9H342 316 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 FGF21Q9NSA1 209 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 H0YIV9 168 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 TIMM8AO60220 97 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SERPINA7P05543 415 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SLC14A1Q13336 389 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF529Q6P280 563 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 MED25Q71SY5 747 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 DNAJC22Q8N4W6 341 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 LILRA3Q8N6C8 439 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ZBTB8AQ96BR9 441 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 METTL9Q9H1A3 318 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 EVA1AQ9H8M9 152 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 UNKLQ9H9P5 680 aaKnown RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 THAP10Q9P2Z0 257 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SLC22A7Q9Y694 548 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 C4BP0C0L5 1744 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF254O75437 659 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 GIFP27352 417 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 OR1D5P58170 312 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 REEP5Q00765 189 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 TSPAN31Q12999 210 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 GGTA1PQ4G0N0 100 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 FAM26DQ5JW98 314 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 OR6F1Q8NGZ6 308 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 HHIPL1Q96JK4 782 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 NOX3Q9HBY0 568 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 GABRPO00591 440 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 HCRTR1O43613 425 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 IFNA17P01571 189 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 OPRD1P41143 372 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 FCRLAQ7L513 359 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 OR14K1Q8NGZ2 314 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF597Q96LX8 424 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF281Q9Y2X9 895 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 CITO14578 2027 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 HOXB5P09067 269 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 MMP12P39900 470 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ESPNLQ6ZVH7 1005 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 TPRA1Q86W33 373 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 PFDN5Q99471 154 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 C20orf27Q9GZN8 174 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 D6RAR5 112 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 SOCS6O14544 535 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 KCNK5O95279 499 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 IGHEP01854 428 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 CHRNB4P30926 498 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 HOXA9P31269 272 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 GIPRP48546 466 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 CLDN6P56747 220 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 PAPD4Q6PIY7 484 aaKnown RBP12.28□□□□□ -0.44
SCN8A-202ENST00000355133 PARM1Q6UWI2 310 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 MFFQ9GZY8 342 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 MYH3P11055 1940 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 TMEM72A0PK05 275 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 PRAMEF27A3QJZ7 478 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 BET1O15155 118 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 CACNG3O60359 315 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 TCN2P20062 427 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 DPP4P27487 766 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 MRPS10P82664 201 aaKnown RBP12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF91Q05481 1191 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 TAZQ16635 292 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF684Q5T5D7 378 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 PRAMEF9Q5VWM5 478 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 METAP1DQ6UB28 335 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-202ENST00000355133 WDSUB1Q8N9V3 476 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ADAMTS14Q8WXS8 1223 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 ELF4Q99607 663 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-202ENST00000355133 SEMA6CQ9H3T2 930 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 PRMT8Q9NR22 394 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-202ENST00000355133 TMEM184BQ9Y519 407 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-202ENST00000355133 NME7Q9Y5B8 376 aa12.28□□□□□ -0.44
SCN8A-202ENST00000355133 TMED7-TICAM2A0A0A6YYA0 188 aa12.27□□□□□ -0.44
SCN8A-202ENST00000355133 A0A1B0GTW7 788 aa12.27□□□□□ -0.44
SCN8A-202ENST00000355133 VEGFCP49767 419 aa12.27□□□□□ -0.44
SCN8A-202ENST00000355133 MTCP1P56278 107 aa12.27□□□□□ -0.44
SCN8A-202ENST00000355133 HSD17B7P56937 341 aa12.27□□□□□ -0.44
SCN8A-202ENST00000355133 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.44
SCN8A-202ENST00000355133 WFDC5Q8TCV5 224 aa12.27□□□□□ -0.44
SCN8A-202ENST00000355133 SLAMF9Q96A28 289 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms