RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 OR2B6P58173 313 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 ZNF239Q16600 458 aaKnown RBP19.84■□□□□ 0.77
SHMT1-203ENST00000354098 FAM98BQ52LJ0 330 aaKnown RBP19.84■□□□□ 0.77
SHMT1-203ENST00000354098 CYP4Z1Q86W10 505 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 TAAR8Q969N4 342 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 TMEM43Q9BTV4 400 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 MAGIXQ9H6Y5 334 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 TIGARQ9NQ88 270 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 AURKCQ9UQB9 309 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 TRAPPC4Q9Y296 219 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 DHRS12A0PJE2 317 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 KPNA4O00629 521 aaPredicted RBP19.83■□□□□ 0.76
SHMT1-203ENST00000354098 ITGA2P17301 1181 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 FPR1P21462 350 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 IFNA8P32881 189 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 LSM11P83369 360 aaKnown RBP eCLIP19.83■□□□□ 0.76
SHMT1-203ENST00000354098 CHRNB3Q05901 458 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 OR7A5Q15622 319 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 TTC33Q6PID6 262 aaPredicted RBP19.83■□□□□ 0.76
SHMT1-203ENST00000354098 CPNE4Q96A23 557 aaPredicted RBP19.83■□□□□ 0.76
SHMT1-203ENST00000354098 CCDC120Q96HB5 630 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 PIP5K1AQ99755 562 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 SLC5A6Q9Y289 635 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 TESMINQ9Y4I5 508 aa19.83■□□□□ 0.76
SHMT1-203ENST00000354098 MBD3L4A6NDZ8 208 aaPredicted RBP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 MBD3L3A6NE82 208 aaPredicted RBP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 MBD3L5A6NJ08 208 aaPredicted RBP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 LIPT2A6NK58 231 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 CIB2O75838 187 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 AHSA1O95433 338 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 MAGEA2P43356 314 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 UGT2B15P54855 530 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 CSNK2A1P68400 391 aaPredicted RBP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 SRSF1Q07955 248 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 CCNIQ14094 377 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 PIWIL3Q7Z3Z3 882 aaKnown RBP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 PIK3C3Q8NEB9 887 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 MBD3L2Q8NHZ7 208 aaPredicted RBP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 WNT2BQ93097 391 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 SLC25A36Q96CQ1 311 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 MEPEQ9NQ76 525 aaPredicted RBP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 MCTS1Q9ULC4 181 aaKnown RBP19.82■□□□□ 0.76
SHMT1-203ENST00000354098 ZNF175Q9Y473 711 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 MYO18BQ8IUG5 2567 aa19.82■□□□□ 0.76
SHMT1-203ENST00000354098 TRAV36DV7A0A075B6V5 113 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 ZNF814B7Z6K7 855 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 LRRN3E7EW58 273 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 SMAD9O15198 467 aaKnown RBP19.81■□□□□ 0.76
SHMT1-203ENST00000354098 SYNGR4O95473 234 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 RAP2AP10114 183 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 UMPSP11172 480 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 ADORA2A-AS1P86434 159 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 LTBQ06643 244 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 TRAM2Q15035 370 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 P4HA3Q7Z4N8 544 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 NAXEQ8NCW5 288 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 OR52J3Q8NH60 311 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 PFN4Q8NHR9 129 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 TMEM239Q8WW34 195 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 POP5Q969H6 163 aaKnown RBP19.81■□□□□ 0.76
SHMT1-203ENST00000354098 PRRG4Q9BZD6 226 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 HIVEP3Q5T1R4 2406 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 FTCDNL1E5RQL4 147 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 H1F0P07305 194 aaKnown RBP19.81■□□□□ 0.76
SHMT1-203ENST00000354098 CBLP22681 906 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 TIMP3P35625 211 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 TMEM211Q6ICI0 200 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 TBPL2Q6SJ96 375 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 SLCO4A1Q96BD0 722 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 CHID1Q9BWS9 393 aa19.81■□□□□ 0.76
SHMT1-203ENST00000354098 FLNCQ14315 2725 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 A0A0G2JNJ9 132 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 ERICH4A6NGS2 130 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 MPDZO75970 2070 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 AKR7A3O95154 331 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 GPIP06744 558 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 NQO1P15559 274 aaKnown RBP19.8■□□□□ 0.76
SHMT1-203ENST00000354098 CEACAM8P31997 349 aaPredicted RBP19.8■□□□□ 0.76
SHMT1-203ENST00000354098 RBM34P42696 430 aaKnown RBP19.8■□□□□ 0.76
SHMT1-203ENST00000354098 AGFG1P52594 562 aaKnown RBP19.8■□□□□ 0.76
SHMT1-203ENST00000354098 SLC35A1P78382 337 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 SPIBQ01892 262 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 FAM69AQ5T7M9 428 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 C5orf46Q6UWT4 87 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 FCRLAQ7L513 359 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 CCDC103Q8IW40 242 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 GCNT2Q8N0V5 402 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 MFSD8Q8NHS3 518 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 SLC7A13Q8TCU3 470 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 DHRS1Q96LJ7 313 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 MOGAT1Q96PD6 335 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 EPYCQ99645 322 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 TM9SF2Q99805 663 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 TAPBPLQ9BX59 468 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 RNF122Q9H9V4 155 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 C20orf141Q9NUB4 165 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 SEC14L4Q9UDX3 406 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 Q9UFV3 132 aa19.8■□□□□ 0.76
SHMT1-203ENST00000354098 MYO7BQ6PIF6 2116 aa19.79■□□□□ 0.76
SHMT1-203ENST00000354098 ANKRD65E5RJM6 399 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms