RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 FAM109BQ6ICB4 259 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 ZNF770Q6IQ21 691 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 SLC8B1Q6J4K2 584 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 SLC25A25Q6KCM7 469 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 NOXRED1Q6NXP6 359 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 PAQR6Q6TCH4 344 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 CEACAM20Q6UY09 585 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 LINGO4Q6UY18 593 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 HIST3H2AQ7L7L0 130 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 LRRC70Q7Z2Q7 622 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 GLT6D1Q7Z4J2 308 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 TPRA1Q86W33 373 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 SIAH3Q8IW03 269 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 ARIH2OSQ8N7S6 290 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 ZNF527Q8NB42 609 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 HJURPQ8NCD3 748 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 HIST1H2ACQ93077 130 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 CXorf40BQ96DE9 158 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 RNFT2Q96EX2 444 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 HMCESQ96FZ2 354 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 IGSF21Q96ID5 467 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 C12orf66Q96MD2 445 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 ZNF582Q96NG8 517 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 COPS8Q99627 209 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 SEMA3CQ99985 751 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 DUSP26Q9BV47 211 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 SARGQ9BW04 601 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 C1QTNF6Q9BXI9 259 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 BTBD1Q9H0C5 482 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 POLR2J3Q9H1A7 115 aaKnown RBP7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 FBXO44Q9H4M3 255 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 TMEM38AQ9H6F2 299 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 SLAMF7Q9NQ25 335 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 NANSQ9NR45 359 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 TMEM248Q9NWD8 314 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 ELOVL2Q9NXB9 296 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 SPHK1Q9NYA1 384 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 KCND3Q9UK17 655 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 SCML2Q9UQR0 700 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 ERVK-19Q9WJR5 959 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 CA5BQ9Y2D0 317 aa7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 PRG3Q9Y2Y8 225 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 NUP214P35658 2090 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-204ENST00000349311 CEP290O15078 2479 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 NUP210Q8TEM1 1887 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CKAP5Q14008 2032 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 NOTCH4Q99466 2003 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 A0A1W2PRB8 838 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 TRBC2A0A5B9 178 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 C1orf226A1L170 272 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 SMIM30A4D0T7 59 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 RAB19A4D1S5 217 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 LRRC72A6NJI9 287 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 GABRR3A8MPY1 467 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 DISC1C4P0D8 188 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 H3BN98 237 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 MID1O15344 667 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 LANCL1O43813 399 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 STK16O75716 305 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 EIF3GO75821 320 aaKnown RBP eCLIP7.07□□□□□ -1.286e-9■■■■□ 22.8
UBE2D3-204ENST00000349311 ATG12O94817 140 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 OR2A4O95047 310 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 GLAP06280 429 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 EIF4EP06730 217 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CD53P19397 219 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 ITGB8P26012 769 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 PPM1AP35813 382 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 GATMP50440 423 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 PGDP52209 483 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 ARHGDIBP52566 201 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CRYBA2P53672 197 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 YBEYP58557 167 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 HTRA4P83105 476 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 ZNF155Q12901 538 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 HTR4Q13639 388 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 SNTB1Q13884 538 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CNN3Q15417 329 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 SEC23BQ15437 767 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 C18orf21Q32NC0 220 aaPredicted RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 RNF212Q495C1 297 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CTXN3Q4LDR2 81 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 SYTL3Q4VX76 610 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 PAN3Q58A45 887 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 DCST1Q5T197 706 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 ARMC12Q5T9G4 340 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CPTPQ5TA50 214 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 TPGS2Q68CL5 300 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 KIAA0895LQ68EN5 471 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 PTRHD1Q6GMV3 140 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 ADNP2Q6IQ32 1131 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 LIN54Q6MZP7 749 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 SLC30A6Q6NXT4 461 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CDC73Q6P1J9 531 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 TRIM40Q6P9F5 258 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 ALKAL2Q6UX46 152 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 TMIGD1Q6UXZ0 262 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CERS6Q6ZMG9 384 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.07□□□□□ -1.284e-6■■■□□ 19.2
UBE2D3-204ENST00000349311 TMEM91Q6ZNR0 172 aa7.07□□□□□ -1.28
UBE2D3-204ENST00000349311 CAMKMTQ7Z624 323 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms