RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 HAO2Q9NYQ3 351 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 NUBP2Q9Y5Y2 271 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 DOCK8Q8NF50 2099 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 NTSR1P30989 418 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 RPL4P36578 427 aaKnown RBP16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 PER3P56645 1201 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 NFATC4Q14934 902 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 UBE2Q1Q7Z7E8 422 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 SLC35F2Q8IXU6 374 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 OR8H3Q8N146 312 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 FAM109AQ8N4B1 249 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 TSSK2Q96PF2 358 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF426Q9BUY5 554 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 HEXA-AS1Q9H8Q6 139 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 LYRM4Q9HD34 91 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 HRASLS2Q9NWW9 162 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 OR6C68A6NDL8 312 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 TGFBR3LH3BV60 316 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 OR10H2O60403 315 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 GALR3O60755 368 aaPredicted RBP16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 H2AFB2P0C5Z0 115 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 TYRP1P17643 537 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 S1PR1P21453 382 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 PGDP52209 483 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 ERVK-25P63136 954 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 TRAM1Q15629 374 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 CSNK1A1LQ8N752 337 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF680Q8NEM1 530 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 HERVK_113Q902F9 699 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 WDR92Q96MX6 357 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 GPR137Q96N19 417 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 SYNDIG1Q9H7V2 258 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 STMN3Q9NZ72 180 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 LRIT1Q9P2V4 623 aa16.61■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF593O00488 134 aaPredicted RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 GPR171O14626 319 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 NKX2-2O95096 273 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 HOXB2P14652 356 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 GDNFP39905 211 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 GBX2P52951 348 aaPredicted RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 ALG11Q2TAA5 492 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 TEX261Q6UWH6 196 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 NUDT18Q6ZVK8 323 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 OR4C3Q8NH37 302 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 NCDNQ9UBB6 729 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 KLK11Q9UBX7 282 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 U3KQ87 197 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 TRAV1-2A0A0B4J238 106 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 ICMTO60725 284 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 KLF8O95600 359 aaPredicted RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 ANXA3P12429 323 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 NANOS3P60323 173 aaKnown RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 RPS15P62841 145 aaKnown RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 KLF9Q13886 244 aaPredicted RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 FGFBP1Q14512 234 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 POU4F3Q15319 338 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 LGALSLQ3ZCW2 172 aaPredicted RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 FAAP20Q6NZ36 180 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 TEX19Q8NA77 164 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 SIPA1Q96FS4 1042 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 CNN2Q99439 309 aaKnown RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 TRAF4Q9BUZ4 470 aaPredicted RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 DPCDQ9BVM2 203 aaPredicted RBP16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 SERTAD3Q9UJW9 196 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 ICAM5Q9UMF0 924 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 RWDD3Q9Y3V2 267 aa16.6■□□□□ 0.25
PTP4A3-202ENST00000349124 IFNGP01579 166 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 UCHL1P09936 223 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF10P21506 573 aaPredicted RBP16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 SELENOPP49908 381 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ZP1P60852 638 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 CAMK2DQ13557 499 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ARHGAP11AQ6P4F7 1023 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 LINGO2Q7L985 606 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 GATSQ8NAP1 163 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF511Q8NB15 262 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ZNF527Q8NB42 609 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 RCBTB1Q8NDN9 531 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 BAHD1Q8TBE0 780 aaPredicted RBP16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 HSPA12BQ96MM6 686 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 PCOLCE2Q9UKZ9 415 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 RCE1Q9Y256 329 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 PCDHGA9Q9Y5G4 932 aaKnown RBP16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 SSNA1O43805 119 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 CRYZL1O95825 349 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 OR2T7P0C7T2 308 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 SRMP19623 302 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ACTC1P68032 377 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ACTA1P68133 377 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 Q6ZTK2 550 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 FCRLAQ7L513 359 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 NPEPL1Q8NDH3 523 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 OR2T27Q8NH04 317 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ADAMTS14Q8WXS8 1223 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 DNAJA3Q96EY1 480 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 TSPAN10Q9H1Z9 355 aaPredicted RBP16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 EMC7Q9NPA0 242 aa16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 ELF5Q9UKW6 265 aaPredicted RBP16.59■□□□□ 0.25
PTP4A3-202ENST00000349124 SPATA2Q9UM82 520 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms