RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PCED1AQ9H1Q7 454 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 EIF3KQ9UBQ5 218 aaKnown RBP19.57■□□□□ 0.72
PTPN18-202ENST00000347849 CLEC4AQ9UMR7 237 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 LINC00862A6NCI5 91 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 B8ZZF3 427 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 PAICSP22234 425 aaKnown RBP19.57■□□□□ 0.72
PTPN18-202ENST00000347849 FPR3P25089 353 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 THBS2P35442 1172 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 EMDP50402 254 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 STX4Q12846 297 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 POU4F3Q15319 338 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 NNATQ16517 81 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 WDR88Q6ZMY6 472 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 CXXC5Q7LFL8 322 aaKnown RBP19.57■□□□□ 0.72
PTPN18-202ENST00000347849 ACBD7Q8N6N7 88 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.57■□□□□ 0.72
PTPN18-202ENST00000347849 OR2T33Q8NG76 320 aa19.57■□□□□ 0.72
PTPN18-202ENST00000347849 ACOT11Q8WXI4 607 aaPredicted RBP19.57■□□□□ 0.72
PTPN18-202ENST00000347849 MRPL39Q9NYK5 338 aaKnown RBP19.57■□□□□ 0.72
PTPN18-202ENST00000347849 WDFY4Q6ZS81 3184 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 TEX13CA0A0J9YWL9 993 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 C7orf66A4D0T2 115 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 RHPN2P1A8MT19 583 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 CDC42EP2O14613 210 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 RAF1P04049 648 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 GALP22466 123 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 RBMS1P29558 406 aaKnown RBP19.56■□□□□ 0.72
PTPN18-202ENST00000347849 CXCL12P48061 93 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 AMZ1Q400G9 498 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 ARL9Q6T311 187 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 LYPD4Q6UWN0 246 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 RIT1Q92963 219 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 STACQ99469 402 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 OR51J1Q9H342 316 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 DPAGT1Q9H3H5 408 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 EMC7Q9NPA0 242 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 PLCL2Q9UPR0 1127 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 CACNA1IQ9P0X4 2223 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.56■□□□□ 0.72
PTPN18-202ENST00000347849 TLCD2A6NGC4 264 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 TCRBP04435 133 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 GIMD1P0DJR0 217 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 ANXA3P12429 323 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 NPR2P20594 1047 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 FGFBP1Q14512 234 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 SLC36A2Q495M3 483 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 SFXN4Q6P4A7 337 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 ZNF620Q6ZNG0 422 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 RBM18Q96H35 190 aaKnown RBP19.56■□□□□ 0.72
PTPN18-202ENST00000347849 SPACA7Q96KW9 195 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 TIMP4Q99727 224 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 MED17Q9NVC6 651 aa19.56■□□□□ 0.72
PTPN18-202ENST00000347849 CEP192Q8TEP8 1941 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 WDR87Q6ZQQ6 2873 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 J3QRE1 110 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 BCAT2O15382 392 aaPredicted RBP19.55■□□□□ 0.72
PTPN18-202ENST00000347849 BRINP1O60477 761 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 ADAM11O75078 769 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 NSA2O95478 260 aaKnown RBP19.55■□□□□ 0.72
PTPN18-202ENST00000347849 FUT1P19526 365 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 GIFP27352 417 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 POU6F2P78424 691 aaPredicted RBP19.55■□□□□ 0.72
PTPN18-202ENST00000347849 GLRX5Q86SX6 157 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 TMEM99Q8N816 258 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 OR5W2Q8NH69 310 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.55■□□□□ 0.72
PTPN18-202ENST00000347849 DNASE2BQ8WZ79 361 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 PRSS27Q9BQR3 290 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 DPCDQ9BVM2 203 aaPredicted RBP19.55■□□□□ 0.72
PTPN18-202ENST00000347849 HEXA-AS1Q9H8Q6 139 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 PDE7BQ9NP56 450 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 PRTFDC1Q9NRG1 225 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 MRPS7Q9Y2R9 242 aaKnown RBP19.55■□□□□ 0.72
PTPN18-202ENST00000347849 CFAP54Q96N23 3096 aa19.55■□□□□ 0.72
PTPN18-202ENST00000347849 CIB4A0PJX0 185 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 CDHR4A6H8M9 788 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 E9PI62 339 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 I3L521 148 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 CTNSO60931 367 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 FZD7O75084 574 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 SOX30O94993 753 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 NKX2-2O95096 273 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 TPOP07202 933 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 CD3GP09693 182 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 NID1P14543 1247 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 PRKACBP22694 351 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 SSTR2P30874 369 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 GCGRP47871 477 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 FAM53BQ14153 422 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 ZNF267Q14586 743 aaPredicted RBP19.54■□□□□ 0.72
PTPN18-202ENST00000347849 DECR1Q16698 335 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 LUZP2Q86TE4 346 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 SLC35F3Q8IY50 421 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 BEST4Q8NFU0 473 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 TRMT10AQ8TBZ6 339 aaKnown RBP19.54■□□□□ 0.72
PTPN18-202ENST00000347849 LRRC20Q8TCA0 184 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 KLHL1Q9NR64 748 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 DAPL1A0PJW8 107 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 REM1O75628 298 aa19.54■□□□□ 0.72
PTPN18-202ENST00000347849 HMGN1P05114 100 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms