RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 OR2T27Q8NH04 317 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 LMF1Q96S06 567 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 MFFQ9GZY8 342 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 TM7SF3Q9NS93 570 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 ZNF337Q9Y3M9 751 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 OR51B4Q9Y5P0 310 aa13.68□□□□□ -0.22
NUP50-201ENST00000347635 A0A0A6YYJ9 748 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 ZNF878C9JN71 531 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 IFNA21P01568 189 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 H2BFMP0C1H6 154 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 PNMTP11086 282 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 GZMMP51124 257 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 FXYD6P3P58550 94 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 TTLL10Q6ZVT0 673 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 SLC22A8Q8TCC7 542 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 RHBDD1Q8TEB9 315 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 CMKLR1Q99788 373 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 SYT4Q9H2B2 425 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 TRIM64A6NGJ6 449 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 C5orf67F2Z3F1 127 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 SSX4O60224 188 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 IGHA2P01877 340 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 RORAP35398 523 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 SOX18P35713 384 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 CCR5P51681 352 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 PRKXP51817 358 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 PLGLB1Q02325 96 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 ABCA11PQ4W5N1 156 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 TECPR1Q7Z6L1 1165 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 PCNPQ8WW12 178 aaKnown RBP13.67□□□□□ -0.22
NUP50-201ENST00000347635 ZFPM2Q8WW38 1151 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 ATF6BQ99941 703 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 C14orf166Q9Y224 244 aaKnown RBP13.67□□□□□ -0.22
NUP50-201ENST00000347635 NARSO43776 548 aaKnown RBP13.67□□□□□ -0.22
NUP50-201ENST00000347635 SRPX2O60687 465 aaPredicted RBP13.67□□□□□ -0.22
NUP50-201ENST00000347635 ZNF41P51814 821 aaPredicted RBP13.67□□□□□ -0.22
NUP50-201ENST00000347635 IFITM3Q01628 133 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 CRMP1Q14194 572 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 RNASE10Q5GAN6 216 aaKnown RBP13.67□□□□□ -0.22
NUP50-201ENST00000347635 MFSD12Q6NUT3 480 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 TMEM150AQ86TG1 271 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 TNFRSF13CQ96RJ3 184 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 GLS2Q9UI32 602 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 OLFM2O95897 454 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 GZMKP49863 264 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 DEFB133Q30KQ1 61 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 LRFN4Q6PJG9 635 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 ZNF620Q6ZNG0 422 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 RDH10Q8IZV5 341 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 NEK7Q8TDX7 302 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 ICKQ9UPZ9 632 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.67□□□□□ -0.22
NUP50-201ENST00000347635 TRABD2BA6NFA1 517 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 MEN1O00255 615 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 CHRM4P08173 479 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 PET100P0DJ07 73 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 TEAD1P28347 426 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 HOXC12P31275 282 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 C21orf58P58505 322 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 P2RY14Q15391 338 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 ELP2Q6IA86 826 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 RLN3Q8WXF3 142 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 SPNS1Q9H2V7 528 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 BCL2L10Q9HD36 194 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 NPFFR2Q9Y5X5 522 aa13.67□□□□□ -0.22
NUP50-201ENST00000347635 SGK494L7N484 410 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 RAB3DO95716 219 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 CD160O95971 181 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 TSFMP43897 325 aaKnown RBP13.66□□□□□ -0.22
NUP50-201ENST00000347635 CBX5P45973 191 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 PXNP49023 591 aaPredicted RBP13.66□□□□□ -0.22
NUP50-201ENST00000347635 LTBQ06643 244 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 KCTD20Q7Z5Y7 419 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 GLB1L2Q8IW92 636 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 FAM46BQ96A09 425 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 PNPLA2Q96AD5 504 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 OR14A2Q96R54 314 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 GSKIPQ9P0R6 139 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 ACOD1A6NK06 481 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 ZNF726A6NNF4 738 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 SLC2A10O95528 541 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 PLGP00747 810 aaPredicted RBP13.66□□□□□ -0.22
NUP50-201ENST00000347635 ZNF806P0C7X5 589 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 VEGFCP49767 419 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 HMGA2P52926 109 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 HYAL1Q12794 435 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 TMEM99Q8N816 258 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 SURF4O15260 269 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 DNAJB6O75190 326 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 FBXO45P0C2W1 286 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 PGCP20142 388 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 NPR2P20594 1047 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 PTPN6P29350 595 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 BDH1Q02338 343 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 SLC16A11Q8NCK7 471 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 HINT3Q9NQE9 182 aaKnown RBP13.66□□□□□ -0.22
NUP50-201ENST00000347635 MEIS3P1A6NDR6 274 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 RDH16O75452 317 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 GPR75O95800 540 aa13.66□□□□□ -0.22
NUP50-201ENST00000347635 SCGB1D2O95969 90 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms