RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 NPIPA5E9PKD4 350 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 CH25HO95992 272 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 ALPLP05186 524 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 TFPIP10646 304 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 BMP7P18075 431 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 GSSP48637 474 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 CLDN15P56746 228 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 RAC1P63000 192 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 INAQ16352 499 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 PRR30Q53SZ7 412 aaPredicted RBP17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 KDM4DQ6B0I6 523 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 GGNQ86UU5 652 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 LINC00471Q8N535 108 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 CISD2Q8N5K1 135 aaKnown RBP17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 ATG16L2Q8NAA4 619 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 MAGEE2Q8TD90 523 aaPredicted RBP17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 GNPDA2Q8TDQ7 276 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 BPIFA2Q96DR5 249 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 SGTBQ96EQ0 304 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 DGCR6LQ9BY27 220 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 USE1Q9NZ43 259 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 NPIPA1Q9UND3 350 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 MGAT4BQ9UQ53 548 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 KIAA1549Q9HCM3 1950 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 TRAV36DV7A0A075B6V5 113 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 TRGV5A0A0B4J1U4 118 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 ERVH48-1M5A8F1 160 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 DLGAP1O14490 977 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 OR7A10O76100 309 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 IGHG3P01860 377 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 TP53P04637 393 aaPredicted RBP17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 IGFBP1P08833 259 aaPredicted RBP17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 ANXA8P13928 327 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 CHMP24386 653 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 LHX2P50458 406 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 SUCLG1P53597 346 aaKnown RBP17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 HSF1Q00613 529 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 ZNF74Q16587 644 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 TMPRSS11FQ6ZWK6 438 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 GALNT5Q7Z7M9 940 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 TEX19Q8NA77 164 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 NEIL3Q8TAT5 605 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 SDCCAG3Q96C92 435 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 DDIT4LQ96D03 193 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 DTNBP1Q96EV8 351 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 OR5B2Q96R09 309 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 POTEKPQ9BYX7 375 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 LDAHQ9H6V9 325 aa17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 SPIN1Q9Y657 262 aaPredicted RBP17.09■□□□□ 0.33
CHMP4A-201ENST00000347519 FTCDNL1E5RQL4 147 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 AHSA1O95433 338 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 ADAP00813 363 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 KLK2P20151 261 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 POU3F2P20265 443 aaPredicted RBP17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 ALDH3A2P51648 485 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 MYBPHQ13203 477 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 FHL1Q13642 323 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 C3AR1Q16581 482 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.08■□□□□ 0.321e-6■■■□□ 16.2
CHMP4A-201ENST00000347519 CTU2Q2VPK5 515 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 GXYLT1Q4G148 440 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 ZNF324BQ6AW86 544 aaPredicted RBP17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 KLHL17Q6TDP4 642 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 KIF18BQ86Y91 864 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 OR13C2Q8NGS9 318 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 SLC25A43Q8WUT9 341 aaPredicted RBP17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 ADGRG7Q96K78 797 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 RBM4BQ9BQ04 359 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 RBM4Q9BWF3 364 aaKnown RBP17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 KLHL4Q9C0H6 718 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 KIF17Q9P2E2 1029 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 REV1Q9UBZ9 1251 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 SEC14L4Q9UDX3 406 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 AP4B1Q9Y6B7 739 aa17.08■□□□□ 0.32
CHMP4A-201ENST00000347519 EFCAB9A8MZ26 197 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 SEC14L5O43304 696 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 IGF2P01344 180 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 FPR3P25089 353 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 IFNGR2P38484 337 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 MAP2K6P52564 334 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 CLDN18P56856 261 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 IL1RL1Q01638 556 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 KLRB1Q12918 225 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 TSPAN31Q12999 210 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 VASNQ6EMK4 673 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 UBQLNLQ8IYU4 475 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 C10orf53Q8N6V4 93 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 ABTB1Q969K4 478 aaPredicted RBP17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 SLC25A36Q96CQ1 311 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 KLHL15Q96M94 604 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 UCK2Q9BZX2 261 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 RASSF4Q9H2L5 321 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 EXO5Q9H790 373 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 PLSCR2Q9NRY7 297 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 TMEM5Q9Y2B1 443 aa17.07■□□□□ 0.32
CHMP4A-201ENST00000347519 TLN1Q9Y490 2541 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-201ENST00000347519 A0A1B0GVC2 190 aa17.06■□□□□ 0.32
CHMP4A-201ENST00000347519 UNC119BA6NIH7 251 aa17.06■□□□□ 0.32
CHMP4A-201ENST00000347519 LIPT2A6NK58 231 aa17.06■□□□□ 0.32
CHMP4A-201ENST00000347519 TNFSF11O14788 317 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms