RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 C3orf49Q96BT1 292 aa14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 ZNF775Q96BV0 537 aaPredicted RBP14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 LRRC58Q96CX6 371 aa14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 PIK3IP1Q96FE7 263 aa14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 SLC47A1Q96FL8 570 aa14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 ZNF300Q96RE9 604 aaPredicted RBP14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 KAT8Q9H7Z6 458 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 ADPRHL2Q9NX46 363 aa14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 SLC9A8Q9Y2E8 581 aa14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 AP3M1Q9Y2T2 418 aa14.01□□□□□ -0.17
TSPAN4-201ENST00000346501 MYO9AB2RTY4 2548 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 M0QX08 132 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 FRS3O43559 492 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 VAMP5O95183 116 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 ADAP00813 363 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 HRGP04196 525 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 DNAJA1P31689 397 aaKnown RBP14□□□□□ -0.17
TSPAN4-201ENST00000346501 SLC16A1P53985 500 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 ADRM1Q16186 407 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 BEX5Q5H9J7 111 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 ALG10BQ5I7T1 473 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 SFRP5Q5T4F7 317 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 C1orf140Q5VVS0 124 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 REP15Q6BDI9 236 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 NANOGP8Q6NSW7 305 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 CGB2Q6NT52 195 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 ARPINQ7Z6K5 226 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 CPLX4Q7Z7G2 160 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 ATG4DQ86TL0 474 aaPredicted RBP14□□□□□ -0.17
TSPAN4-201ENST00000346501 LSMEM1Q8N8F7 131 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 RP9Q8TA86 221 aaKnown RBP14□□□□□ -0.17
TSPAN4-201ENST00000346501 ZNF317Q96PQ6 595 aaPredicted RBP14□□□□□ -0.17
TSPAN4-201ENST00000346501 EPYCQ99645 322 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 SF3B5Q9BWJ5 86 aaKnown RBP14□□□□□ -0.17
TSPAN4-201ENST00000346501 NANOGQ9H9S0 305 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 UPB1Q9UBR1 384 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 ST6GALNAC2Q9UJ37 374 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 ADGRG4Q8IZF6 3080 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 APCP25054 2843 aa14□□□□□ -0.17
TSPAN4-201ENST00000346501 CIB4A0PJX0 185 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 ZC3H12DA2A288 527 aaKnown RBP13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 LIPT2A6NK58 231 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 FBP2O00757 339 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 MFN2O95140 757 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 RAF1P04049 648 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 C8BP07358 591 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 IMPDH2P12268 514 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 CD1EP15812 388 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 CCKARP32238 428 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 PCGF2P35227 344 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 HOXC5Q00444 222 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 BNIP2Q12982 314 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 MFSD13AQ14CX5 517 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 VMACQ2NL98 169 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 FBXW9Q5XUX1 488 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 FAM91A1Q658Y4 838 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 ALKBH2Q6NS38 261 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 CASP12Q6UXS9 341 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 BHLHA15Q7RTS1 189 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 SPATA21Q7Z572 469 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 NET1Q7Z628 596 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 GPAT4Q86UL3 456 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 PTOV1Q86YD1 416 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 WFDC8Q8IUA0 241 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 CCDC103Q8IW40 242 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 GABRG1Q8N1C3 465 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 C10orf111Q8N326 155 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 MFSD8Q8NHS3 518 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 C10orf82Q8WW14 230 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 HSD17B8Q92506 261 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 SLC38A4Q969I6 547 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 MUCL1Q96DR8 90 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 PIF1Q9H611 641 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 CHST2Q9Y4C5 530 aa13.99□□□□□ -0.17
TSPAN4-201ENST00000346501 A0A1B0GWA3 101 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 CCT8L1PA6NM43 557 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 KRT33AO76009 404 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 AKR7A3O95154 331 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 PCBP3P57721 371 aaKnown RBP13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 H3F3AP84243 136 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 TGFBR3Q03167 851 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 SELPLGQ14242 412 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 SWT1Q5T5J6 900 aaKnown RBP13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 ABHD12BQ7Z5M8 362 aaPredicted RBP13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 SMYD1Q8NB12 490 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 PROX1Q92786 737 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 S100PBPQ96BU1 408 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 SLC25A36Q96CQ1 311 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 ELAC2Q9BQ52 826 aaKnown RBP13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 FAM107BQ9H098 131 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 ASB6Q9NWX5 421 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 ING1Q9UK53 422 aaPredicted RBP13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 RASD1Q9Y272 281 aa13.98□□□□□ -0.17
TSPAN4-201ENST00000346501 AQP7P3A6NL99 342 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 ZNF716A6NP11 495 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 NDUFAB1O14561 156 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 TPST1O60507 370 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 FMO6PO60774 539 aa13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 GCM2O75603 506 aaPredicted RBP13.97□□□□□ -0.17
TSPAN4-201ENST00000346501 OPN1SWP03999 348 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms