RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 PROS1P07225 676 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 NID1P14543 1247 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 MAKP20794 623 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 AGTR1P30556 359 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 PBX2P40425 430 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 HTR4Q13639 388 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 SLC25A35Q3KQZ1 300 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 ZNF511Q8NB15 262 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 KLHL15Q96M94 604 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 CDCP1Q9H5V8 836 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 POT1Q9NUX5 634 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 IL20Q9NYY1 176 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 NEUROG3Q9Y4Z2 214 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 TEX51A0A1B0GUA7 166 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 F13BP05160 661 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 SDHBP21912 280 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 CCR9P51686 369 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 LTBQ06643 244 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 GK2Q14410 553 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-201ENST00000345512 FAAH2Q6GMR7 532 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 DNM1P34Q6PK57 102 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 ZNF793Q6ZN11 406 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 ZNF547Q8IVP9 402 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 C7orf61Q8IZ16 206 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 TMEM41AQ96HV5 264 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 SLC6A7Q99884 636 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 CYSLTR2Q9NS75 346 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 WSB2Q9NYS7 404 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-201ENST00000345512 NPIPA5E9PKD4 350 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 CLUP10909 449 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 TRHRP34981 398 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-201ENST00000345512 SCRN3Q0VDG4 424 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 RNASE10Q5GAN6 216 aaKnown RBP14.38□□□□□ -0.11
PTPRU-201ENST00000345512 C12orf40Q86WS4 652 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 ZNF615Q8N8J6 731 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 MYADMQ96S97 322 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 DPYSL5Q9BPU6 564 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 LIN7BQ9HAP6 207 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 CBLCQ9ULV8 474 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 NPIPA1Q9UND3 350 aa14.38□□□□□ -0.11
PTPRU-201ENST00000345512 SYPP08247 313 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 PGAM2P15259 253 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 SRMP19623 302 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 GJA4P35212 333 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 PRKXP51817 358 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 GALK2Q01415 458 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 FBXL6Q8N531 539 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 FOXN4Q96NZ1 517 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 ALG12Q9BV10 488 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 HDAC8Q9BY41 377 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 ERVK-19Q9WJR5 959 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 EEF1E1-BLOC1S5C9J1V9 151 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 SCO2O43819 266 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 PRAMEF2O60811 474 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 CSF1P09603 554 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 YIF1BQ5BJH7 314 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 ZNF440Q8IYI8 595 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 BOLLQ8N9W6 283 aaKnown RBP14.37□□□□□ -0.11
PTPRU-201ENST00000345512 OR9A4Q8NGU2 314 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 ACOXLQ9NUZ1 547 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 KCNN3Q9UGI6 736 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 APOBEC3BQ9UH17 382 aaKnown RBP14.37□□□□□ -0.11
PTPRU-201ENST00000345512 FLVCR2Q9UPI3 526 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 ZNF337Q9Y3M9 751 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 TDRD15B5MCY1 1934 aaKnown RBP14.37□□□□□ -0.11
PTPRU-201ENST00000345512 A0A0A6YYD5 115 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 RIDAP52758 137 aaKnown RBP14.37□□□□□ -0.11
PTPRU-201ENST00000345512 BDH1Q02338 343 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 PXDC1Q5TGL8 231 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 SLC6A19Q695T7 634 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 HAGHLQ6PII5 290 aaPredicted RBP14.37□□□□□ -0.11
PTPRU-201ENST00000345512 OR2AJ1Q8NGZ0 328 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 OR52I2Q8NH67 350 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 MARVELD1Q9BSK0 173 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 ZNF350Q9GZX5 532 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 CST11Q9H112 138 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 LIPCP11150 499 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 KIAA1024LP59773 190 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 MAP6Q96JE9 813 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 OR2S2Q9NQN1 319 aa14.37□□□□□ -0.11
PTPRU-201ENST00000345512 SELENOFO60613 162 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 NTN1O95631 604 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 CXCL10P02778 98 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 RLN2P04090 185 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 AKAIN1P0CW23 69 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 CD34P28906 385 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 TSFMP43897 325 aaKnown RBP14.36□□□□□ -0.11
PTPRU-201ENST00000345512 PXNP49023 591 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-201ENST00000345512 SQSTM1Q13501 440 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 ERV3-1Q14264 604 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 GLYR1Q49A26 553 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-201ENST00000345512 ARHGAP40Q5TG30 622 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 CD300LDQ6UXZ3 194 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 SLC29A4Q7RTT9 530 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 DGLUCYQ7Z3D6 616 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 GLB1L2Q8IW92 636 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 SFXN2Q96NB2 322 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 CLDND1Q9NY35 253 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 GSKIPQ9P0R6 139 aa14.36□□□□□ -0.11
PTPRU-201ENST00000345512 PLCL2Q9UPR0 1127 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms